RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 ZNF506Q5JVG8 444 aa11.74□□□□□ -0.53
CSNK1D-201ENST00000269361 LRCOL1A6NCL2 159 aa11.73□□□□□ -0.53
CSNK1D-201ENST00000269361 LELP1Q5T871 98 aa11.73□□□□□ -0.53
CSNK1D-201ENST00000269361 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 PTTG1O95997 202 aa11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 MGST1P10620 155 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 LINC00479Q96M42 142 aa11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
CSNK1D-201ENST00000269361 IGLV5-52A0A0A0MRZ9 124 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 IGHV3-30P01768 117 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 IGHV3-33P01772 117 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 IGHV3-30-3P0DP02 117 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 IGHV3-30-5P0DP03 117 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 Q5VSD8 79 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 RPL7L1Q6DKI1 246 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 Q6ZSN1 163 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 INO80EQ8NBZ0 244 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 FRZBQ92765 325 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 Q9HAA7 133 aa11.71□□□□□ -0.53
CSNK1D-201ENST00000269361 HERC1Q15751 4861 aa11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 TRAV34A0A0B4J273 112 aa11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 IGKV3D-20A0A0C4DH25 116 aa11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 GIPP09681 153 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 ZFP2Q6ZN57 461 aa11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 BATF3Q9NR55 127 aa11.7□□□□□ -0.54
CSNK1D-201ENST00000269361 BORCS7-ASMTA0A0B4J1R7 106 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 A8MWV9 139 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 IFNA7P01567 189 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 S100A4P26447 101 aaKnown RBP11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 ZNF726P1Q15940 193 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 PIK3CD-AS1Q5SR53 167 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 PARLQ9H300 379 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 ARL2-SNX15V9GYD0 113 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 VPS13BQ7Z7G8 4022 aa11.69□□□□□ -0.54
CSNK1D-201ENST00000269361 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
CSNK1D-201ENST00000269361 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-201ENST00000269361 ASIPP42127 132 aa11.68□□□□□ -0.54
CSNK1D-201ENST00000269361 LGALSLQ3ZCW2 172 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-201ENST00000269361 Q8N814 137 aa11.68□□□□□ -0.54
CSNK1D-201ENST00000269361 CTXND1A0A1B0GTU2 59 aa11.67□□□□□ -0.54
CSNK1D-201ENST00000269361 PEX7O00628 323 aa11.67□□□□□ -0.54
CSNK1D-201ENST00000269361 UBE2G2P60604 165 aa11.67□□□□□ -0.54
CSNK1D-201ENST00000269361 FXYD6-FXYD2A0A087WZ82 144 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 GAGE12JA6NER3 117 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 LINC00694P0DN24 101 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 GAGE1Q13065 139 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 GAGE4Q13068 117 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 GAGE5Q13069 117 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 LAGE3Q14657 143 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 GAGE13Q4V321 117 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 TMEM70Q9BUB7 260 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 IL36BQ9NZH7 164 aa11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 SRRM2Q9UQ35 2752 aaKnown RBP11.66□□□□□ -0.54
CSNK1D-201ENST00000269361 FAM74A7A6NL05 159 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 B4DEV8 164 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 HAMPP81172 84 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 UFSP1Q6NVU6 142 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 Q86TA4 180 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 Q8N3U1 123 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 HIST1H2BAQ96A08 127 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 JPT2Q9H910 190 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 Q9UF83 564 aa11.65□□□□□ -0.54
CSNK1D-201ENST00000269361 KRBOX1C9JBD0 128 aa11.64□□□□□ -0.55
CSNK1D-201ENST00000269361 CRIP1P50238 77 aa11.64□□□□□ -0.55
CSNK1D-201ENST00000269361 FGF8P55075 233 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-201ENST00000269361 AKR1C8PQ5T2L2 129 aa11.64□□□□□ -0.55
CSNK1D-201ENST00000269361 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
CSNK1D-201ENST00000269361 FAM229AH3BQW9 127 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 H3BVH4 76 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 DNLZQ5SXM8 178 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 COX8CQ7Z4L0 72 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 ZFP30Q9Y2G7 519 aa11.63□□□□□ -0.55
CSNK1D-201ENST00000269361 A0A087WWC5 75 aa11.62□□□□□ -0.55
CSNK1D-201ENST00000269361 TRAV8-3A0A0A6YYJ7 113 aa11.62□□□□□ -0.55
CSNK1D-201ENST00000269361 M0R036 132 aa11.62□□□□□ -0.55
CSNK1D-201ENST00000269361 SH2D1AO60880 128 aa11.62□□□□□ -0.55
CSNK1D-201ENST00000269361 ARMS2P0C7Q2 107 aa11.62□□□□□ -0.55
CSNK1D-201ENST00000269361 DNAH8Q96JB1 4490 aa11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 GRIFINA4D1Z8 144 aa11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 RHODO00212 210 aa11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 FAM162BQ5T6X4 162 aa11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 DAZ4Q86SG3 579 aaKnown RBP11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 OR11H4Q8NGC9 324 aa11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 DAZ3Q9NR90 486 aaKnown RBP11.61□□□□□ -0.55
CSNK1D-201ENST00000269361 DMBT1Q9UGM3 2413 aaPredicted RBP11.6□□□□□ -0.55
CSNK1D-201ENST00000269361 MAP1LC3B2A6NCE7 125 aa11.6□□□□□ -0.55
CSNK1D-201ENST00000269361 WFDC2Q14508 124 aa11.6□□□□□ -0.55
CSNK1D-201ENST00000269361 TOR2AQ5JU69 321 aa11.6□□□□□ -0.55
CSNK1D-201ENST00000269361 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms