RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 WI2-2373I1.2A0A1W2PRP0 233 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 NPYP01303 97 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 WIPF2Q8TF74 440 aaPredicted RBP10.61□□□□□ -0.71
NPC1-201ENST00000269228 JPT2Q9H910 190 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 PAX2Q02962 417 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 HSD52Q0P140 79 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 C10orf126Q8N4M7 172 aa10.61□□□□□ -0.71
NPC1-201ENST00000269228 A0A0J9YY99 117 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 LYPD6BQ8NI32 183 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 MPV17L2Q567V2 206 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 C1orf229Q6ZS94 237 aaPredicted RBP10.6□□□□□ -0.71
NPC1-201ENST00000269228 TLN2Q9Y4G6 2542 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 TMEM89A2RUT3 159 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 MYCNOSP40205 109 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 BRWD1-AS2P59051 145 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
NPC1-201ENST00000269228 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
NPC1-201ENST00000269228 K7EMT4 169 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 C10orf91Q5T1B1 145 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 STPG4Q8N801 248 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 SMIM2Q9BVW6 85 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 JMJD1CQ15652 2540 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 PRAC2D3DTV9 90 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 PLA2G2EQ9NZK7 142 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
NPC1-201ENST00000269228 UTRNP46939 3433 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 PLXNB1O43157 2135 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 FSTL3O95633 263 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 TSPAN13O95857 204 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 DEFB1P60022 68 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 C4orf3Q8WVX3 66 aa10.59□□□□□ -0.71
NPC1-201ENST00000269228 SORL1Q92673 2214 aa10.58□□□□□ -0.72
NPC1-201ENST00000269228 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
NPC1-201ENST00000269228 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
NPC1-201ENST00000269228 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
NPC1-201ENST00000269228 ZFYVE26Q68DK2 2539 aa10.58□□□□□ -0.72
NPC1-201ENST00000269228 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
NPC1-201ENST00000269228 TMEM141Q96I45 108 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 VWC2LB2RUY7 222 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 ERG28Q9UKR5 140 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 A0A087X0K7 114 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 P0C879 139 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 PMVKQ15126 192 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 Q6YL49 198 aa10.57□□□□□ -0.72
NPC1-201ENST00000269228 RHOHQ15669 191 aa10.56□□□□□ -0.72
NPC1-201ENST00000269228 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
NPC1-201ENST00000269228 CD5LO43866 347 aa10.56□□□□□ -0.72
NPC1-201ENST00000269228 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
NPC1-201ENST00000269228 ZNF479Q96JC4 524 aa10.56□□□□□ -0.72
NPC1-201ENST00000269228 ESDP10768 282 aa10.56□□□□□ -0.72
NPC1-201ENST00000269228 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
NPC1-201ENST00000269228 SRSF2Q01130 221 aaKnown RBP10.55□□□□□ -0.72
NPC1-201ENST00000269228 ARHGAP32A7KAX9 2087 aa10.55□□□□□ -0.72
NPC1-201ENST00000269228 ANGP03950 147 aaKnown RBP10.55□□□□□ -0.72
NPC1-201ENST00000269228 ADAMTSL5Q6ZMM2 481 aa10.55□□□□□ -0.72
NPC1-201ENST00000269228 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
NPC1-201ENST00000269228 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
NPC1-201ENST00000269228 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 IGHG4P01861 327 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 TRAV8-2A0A0B4J237 113 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 COX11Q9Y6N1 276 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
NPC1-201ENST00000269228 GHRHP01286 108 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 RNASE13Q5GAN3 156 aaKnown RBP10.54□□□□□ -0.72
NPC1-201ENST00000269228 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 GATD1Q8NB37 220 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 C20orf78Q9BR46 151 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 OCIAD2Q56VL3 154 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
NPC1-201ENST00000269228 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
NPC1-201ENST00000269228 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
NPC1-201ENST00000269228 KIAA1549Q9HCM3 1950 aa10.53□□□□□ -0.72
NPC1-201ENST00000269228 IGKV1D-37A0A075B6S9 117 aa10.53□□□□□ -0.72
NPC1-201ENST00000269228 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
NPC1-201ENST00000269228 ZNF48Q96MX3 618 aaPredicted RBP10.53□□□□□ -0.72
NPC1-201ENST00000269228 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
NPC1-201ENST00000269228 ZNF493Q6ZR52 646 aa10.53□□□□□ -0.72
NPC1-201ENST00000269228 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
NPC1-201ENST00000269228 PLA2G2AP14555 144 aa10.52□□□□□ -0.72
NPC1-201ENST00000269228 RNF152Q8N8N0 203 aa10.52□□□□□ -0.72
NPC1-201ENST00000269228 ABCA12Q86UK0 2595 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 PFN2P35080 140 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 IGF1P05019 195 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 LY6LH3BQJ8 138 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 LEPROTO15243 131 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 ESM1Q9NQ30 184 aa10.52□□□□□ -0.73
NPC1-201ENST00000269228 SPART-AS1P0CW21 52 aa10.51□□□□□ -0.73
NPC1-201ENST00000269228 IGLC2P0DOY2 106 aa10.51□□□□□ -0.73
NPC1-201ENST00000269228 DEFB135Q30KP9 77 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms