RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TMEM158Q8WZ71 300 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 GTSF1Q8WW33 167 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 CFAP46Q8IYW2 2715 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 A0A0J9YX75 114 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 JOSD1Q15040 202 aaPredicted RBP10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 VAMP3Q15836 100 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 LAMTOR2Q9Y2Q5 125 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 A8MWV9 139 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 SNAI2O43623 268 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 MRAP2Q96G30 205 aa10.97□□□□□ -0.65
PDLIM2-201ENST00000265810 OR11H2Q8NH07 326 aa10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 C2orf88Q9BSF0 95 aa10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 RHODO00212 210 aa10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 IGLV2-8P01709 118 aa10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 LINC00322Q6ZN03 302 aaPredicted RBP10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 NDUFA11Q86Y39 141 aa10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 HELZ2Q9BYK8 2649 aaKnown RBP10.96□□□□□ -0.65
PDLIM2-201ENST00000265810 DMXL2Q8TDJ6 3036 aa10.96□□□□□ -0.66
PDLIM2-201ENST00000265810 LGALS3P17931 250 aaKnown RBP10.96□□□□□ -0.66
PDLIM2-201ENST00000265810 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.66
PDLIM2-201ENST00000265810 LINC01559Q495D7 138 aa10.96□□□□□ -0.66
PDLIM2-201ENST00000265810 PET117Q6UWS5 81 aa10.96□□□□□ -0.66
PDLIM2-201ENST00000265810 K7EQG2 157 aa10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 NPYP01303 97 aa10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 C20orf173Q96LM9 149 aa10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 FRYQ5TBA9 3013 aa10.95□□□□□ -0.66
PDLIM2-201ENST00000265810 C3orf79P0CE67 100 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 KLF5Q13887 457 aaPredicted RBP10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 BOD1L1Q8NFC6 3051 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 MAP6D1Q9H9H5 199 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 FRMD6-AS1P0C7T7 363 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 NOP10Q9NPE3 64 aaKnown RBP10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 C19orf71A6NCJ1 209 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 SPXQ9BT56 116 aa10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 TET2Q6N021 2002 aaPredicted RBP10.94□□□□□ -0.66
PDLIM2-201ENST00000265810 F8P00451 2351 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 PRSS2P07478 247 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 HINT1P49773 126 aaPredicted RBP10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 CRIP2P52943 208 aaPredicted RBP10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 MYO15AQ9UKN7 3530 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 SDHAF1A6NFY7 115 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 M0R2P5 195 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 GAGE1Q13065 139 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 GAGE4Q13068 117 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 GAGE5Q13069 117 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 Q8N1Y9 231 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 U3KQE9 123 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 IGKV3D-20A0A0C4DH25 116 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 DAD1P61803 113 aa10.93□□□□□ -0.66
PDLIM2-201ENST00000265810 ZNF25P17030 456 aaPredicted RBP10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 IGSF10Q6WRI0 2623 aa10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 PYY3Q5JQD4 70 aa10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 DPM2O94777 84 aa10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 SCGB1C2P0DMR2 95 aa10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 CHTOPQ9Y3Y2 248 aaKnown RBP10.92□□□□□ -0.66
PDLIM2-201ENST00000265810 TRAV8-2A0A0B4J237 113 aa10.91□□□□□ -0.66
PDLIM2-201ENST00000265810 GATA1P15976 413 aaPredicted RBP10.91□□□□□ -0.66
PDLIM2-201ENST00000265810 F5H768 121 aa10.91□□□□□ -0.66
PDLIM2-201ENST00000265810 DMRTA1Q5VZB9 504 aa10.91□□□□□ -0.66
PDLIM2-201ENST00000265810 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
PDLIM2-201ENST00000265810 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 HLA-DRB4P13762 266 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 INSL3P51460 131 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 TOMM7Q9P0U1 55 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 HLA-DRB4X5D2U9 266 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 GCSHP23434 173 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 Q8N8P6 123 aa10.9□□□□□ -0.66
PDLIM2-201ENST00000265810 A0A087WX48 190 aa10.9□□□□□ -0.67
PDLIM2-201ENST00000265810 LINC01549A6NIU2 74 aa10.9□□□□□ -0.67
PDLIM2-201ENST00000265810 SYS1-DBNDD2H3BUS1 97 aa10.9□□□□□ -0.67
PDLIM2-201ENST00000265810 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.9□□□□□ -0.67
PDLIM2-201ENST00000265810 HIST1H4GQ99525 98 aa10.9□□□□□ -0.67
PDLIM2-201ENST00000265810 MIEN1Q9BRT3 115 aa10.9□□□□□ -0.67
PDLIM2-201ENST00000265810 DEFB125Q8N687 156 aa10.89□□□□□ -0.67
PDLIM2-201ENST00000265810 MRAPQ8TCY5 172 aa10.89□□□□□ -0.67
PDLIM2-201ENST00000265810 EDN2P20800 178 aa10.89□□□□□ -0.67
PDLIM2-201ENST00000265810 IGKCP01834 107 aa10.89□□□□□ -0.67
PDLIM2-201ENST00000265810 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
PDLIM2-201ENST00000265810 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
PDLIM2-201ENST00000265810 GDF5OSQ5U4N7 250 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 DNLZQ5SXM8 178 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 ADAMTSL5Q6ZMM2 481 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 RNF152Q8N8N0 203 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 MDFICQ9P1T7 246 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms