RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 NDFIP1Q9BT67 221 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 ACTR3CQ9C0K3 210 aaPredicted RBP6.59□□□□□ -1.35
VPS41-201ENST00000265745 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 TMEM167BQ9NRX6 74 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 C11orf21Q9P2W6 132 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 PSG8Q9UQ74 426 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
VPS41-201ENST00000265745 GGTLC3B5MD39 225 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 K7EQM0 130 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 TAAR5O14804 337 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 CXorf1O96002 111 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 GCGP01275 180 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 PFN1P07737 140 aaKnown RBP6.58□□□□□ -1.36
VPS41-201ENST00000265745 GIPP09681 153 aaPredicted RBP6.58□□□□□ -1.36
VPS41-201ENST00000265745 EVI2AP22794 236 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 TIRAPP58753 221 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 MSRB1Q9NZV6 116 aa6.58□□□□□ -1.36
VPS41-201ENST00000265745 A0A1W2PRE2 83 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 RNF222A6NCQ9 220 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 RS1O15537 224 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 CIDEAO60543 219 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS41-201ENST00000265745 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 FLI1Q01543 452 aaPredicted RBP6.57□□□□□ -1.36
VPS41-201ENST00000265745 SAPCD1Q5SSQ6 148 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 CFAP126Q5VTH2 177 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 RPL7L1Q6DKI1 246 aaKnown RBP6.57□□□□□ -1.36
VPS41-201ENST00000265745 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 DPPA3Q6W0C5 159 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 CYB561D1Q8N8Q1 229 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 INO80EQ8NBZ0 244 aaPredicted RBP6.57□□□□□ -1.36
VPS41-201ENST00000265745 PTH2Q96A98 100 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 LINC00479Q96M42 142 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 C9orf85Q96MD7 179 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 SCRT2Q9NQ03 307 aa6.57□□□□□ -1.36
VPS41-201ENST00000265745 A0A087WTM6 91 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 FBLL1A6NHQ2 334 aaKnown RBP6.56□□□□□ -1.36
VPS41-201ENST00000265745 CRYGDP07320 174 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 ZNF726P1Q15940 193 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 SMUG1Q53HV7 270 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 C10orf126Q8N4M7 172 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 TMEM75Q8N9X5 138 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 NHLRC2Q8NBF2 726 aa6.56□□□□□ -1.36
VPS41-201ENST00000265745 FXYD6-FXYD2A0A087WZ82 144 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 TRAV34A0A0B4J273 112 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 IGKV3D-20A0A0C4DH25 116 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 IGHV3-38A0A0C4DH36 116 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
VPS41-201ENST00000265745 ZFP69Q49AA0 526 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
VPS41-201ENST00000265745 IGHV3-73A0A0B4J1V6 119 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 CTXND1A0A1B0GTU2 59 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 IFNA7P01567 189 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
VPS41-201ENST00000265745 PPT1P50897 306 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 XGP55808 180 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 RHOHQ15669 191 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 LINC01556Q5JQF7 62 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 ZNF506Q5JVG8 444 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 OR2T35Q8NGX2 323 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 ARL2-SNX15V9GYD0 113 aa6.54□□□□□ -1.36
VPS41-201ENST00000265745 TRAV8-6A0A0B4J262 113 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 FAM74A7A6NL05 159 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 IBA57-AS1B1ANH7 110 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 F5H697 171 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 G3V3Q6 166 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 LELP1Q5T871 98 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 Q6ZSN1 163 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 HIST1H2BAQ96A08 127 aa6.53□□□□□ -1.36
VPS41-201ENST00000265745 NKX6-2Q9C056 277 aaPredicted RBP6.53□□□□□ -1.36
VPS41-201ENST00000265745 PEX7O00628 323 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 S100A4P26447 101 aaKnown RBP6.52□□□□□ -1.37
VPS41-201ENST00000265745 CRIP1P50238 77 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 FGF8P55075 233 aaPredicted RBP6.52□□□□□ -1.37
VPS41-201ENST00000265745 UBE2G2P60604 165 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 OR10J3Q5JRS4 329 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 AKR1C8PQ5T2L2 129 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 ZFP2Q6ZN57 461 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 ATP6V0E2Q8NHE4 81 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 GTSF1LQ9H1H1 148 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 PARLQ9H300 379 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 CYTL1Q9NRR1 136 aa6.52□□□□□ -1.37
VPS41-201ENST00000265745 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 A8MWV9 139 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 ASIPP42127 132 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 LGALSLQ3ZCW2 172 aaPredicted RBP6.51□□□□□ -1.37
VPS41-201ENST00000265745 UFSP1Q6NVU6 142 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 COX8CQ7Z4L0 72 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 Q86TA4 180 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 SAMD10Q9BYL1 202 aa6.51□□□□□ -1.37
VPS41-201ENST00000265745 IL36BQ9NZH7 164 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms