RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 KLK9Q9UKQ9 250 aa15.32■□□□□ 0.04
CSPG5-201ENST00000264723 TNRC6BQ9UPQ9 1833 aaKnown RBP15.31■□□□□ 0.04
CSPG5-201ENST00000264723 GNRH2O43555 120 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 BUB3O43684 328 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 AMTNQ6UX39 209 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 IGKV3D-20A0A0C4DH25 116 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 LY6G5BQ8NDX9 201 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 TACC2O95359 2948 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 ANXA2RQ3ZCQ2 193 aa15.31■□□□□ 0.04
CSPG5-201ENST00000264723 RAI1Q7Z5J4 1906 aaPredicted RBP15.3■□□□□ 0.04
CSPG5-201ENST00000264723 DUSP14O95147 198 aaKnown RBP15.3■□□□□ 0.04
CSPG5-201ENST00000264723 C5orf56Q8N8D9 126 aa15.3■□□□□ 0.04
CSPG5-201ENST00000264723 TRBV12-3P01733 135 aa15.29■□□□□ 0.04
CSPG5-201ENST00000264723 NDUFA4O00483 81 aa15.29■□□□□ 0.04
CSPG5-201ENST00000264723 GATA3P23771 443 aa15.29■□□□□ 0.04
CSPG5-201ENST00000264723 LGALS3P17931 250 aaKnown RBP15.28■□□□□ 0.04
CSPG5-201ENST00000264723 C9orf118A6NHY6 69 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 FSTL3O95633 263 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 TCTEX1D4Q5JR98 221 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 FLNBO75369 2602 aaKnown RBP15.28■□□□□ 0.04
CSPG5-201ENST00000264723 TRGV2A0A075B6R0 118 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 IGF1P05019 195 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 SMAGPQ0VAQ4 97 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 ORMDL2Q53FV1 153 aa15.28■□□□□ 0.04
CSPG5-201ENST00000264723 GEMIN7Q9H840 131 aaKnown RBP15.28■□□□□ 0.04
CSPG5-201ENST00000264723 PPP1R17O96001 155 aa15.27■□□□□ 0.04
CSPG5-201ENST00000264723 Q6ZQT7 251 aa15.27■□□□□ 0.04
CSPG5-201ENST00000264723 RPL39LQ96EH5 51 aaKnown RBP15.27■□□□□ 0.04
CSPG5-201ENST00000264723 PTPRBP23467 1997 aa15.27■□□□□ 0.04
CSPG5-201ENST00000264723 A0A1W2PPR1 153 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 IGHV3-53P01767 116 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 Q8N8P6 123 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 AJUBAQ96IF1 538 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 DPH3P1Q9H4G8 78 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 TMEM238LA0A1B0GVL6 79 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 A6NJY4 79 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 DCHS1Q96JQ0 3298 aa15.27■□□□□ 0.03
CSPG5-201ENST00000264723 GTSF1LQ9H1H1 148 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 SUMO2P61956 95 aaKnown RBP15.26■□□□□ 0.03
CSPG5-201ENST00000264723 MRGPRG-AS1Q2M3A8 158 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 ZNF876PQ49A33 203 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 C2orf66Q6UXQ4 117 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 SAMD13Q5VXD3 122 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 UNQ9165/PRO28630Q6UXU0 137 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 PRORYQ9H606 182 aa15.26■□□□□ 0.03
CSPG5-201ENST00000264723 H3BRM9 83 aa15.25■□□□□ 0.03
CSPG5-201ENST00000264723 H7C1H1 209 aa15.25■□□□□ 0.03
CSPG5-201ENST00000264723 TNFRSF13BO14836 293 aaPredicted RBP15.25■□□□□ 0.03
CSPG5-201ENST00000264723 ANKRD17O75179 2603 aaKnown RBP15.25■□□□□ 0.03
CSPG5-201ENST00000264723 FXYD2P54710 66 aa15.25■□□□□ 0.03
CSPG5-201ENST00000264723 CIDEAO60543 219 aa15.25■□□□□ 0.03
CSPG5-201ENST00000264723 XCL2Q9UBD3 114 aa15.25■□□□□ 0.03
CSPG5-201ENST00000264723 LY6LH3BQJ8 138 aa15.24■□□□□ 0.03
CSPG5-201ENST00000264723 ODF3BA8MYP8 253 aa15.24■□□□□ 0.03
CSPG5-201ENST00000264723 SMAD5-AS1Q9Y6J3 95 aa15.24■□□□□ 0.03
CSPG5-201ENST00000264723 RPL35AP18077 110 aaKnown RBP15.24■□□□□ 0.03
CSPG5-201ENST00000264723 UBE2L6O14933 153 aa15.23■□□□□ 0.03
CSPG5-201ENST00000264723 IGHV7-4-1A0A0J9YVY3 117 aa15.23■□□□□ 0.03
CSPG5-201ENST00000264723 ETDBQ3ZM63 59 aa15.23■□□□□ 0.03
CSPG5-201ENST00000264723 C11orf71Q6IPW1 123 aa15.23■□□□□ 0.03
CSPG5-201ENST00000264723 SPOCK3Q9BQ16 436 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 DMXL1Q9Y485 3027 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 TRBV25-1A0A075B6N4 114 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 A0A0U1RRA0 63 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 VCX2Q9H322 139 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 SMPXQ9UHP9 88 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 H3BMG7 143 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 ADAMTSL5Q6ZMM2 481 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 SMIM2Q9BVW6 85 aa15.22■□□□□ 0.03
CSPG5-201ENST00000264723 OR5A1Q8NGJ0 315 aa15.21■□□□□ 0.03
CSPG5-201ENST00000264723 TRAV2A0A0B4J234 112 aa15.21■□□□□ 0.02
CSPG5-201ENST00000264723 HTN3P15516 51 aa15.21■□□□□ 0.02
CSPG5-201ENST00000264723 NPC2P61916 151 aa15.21■□□□□ 0.02
CSPG5-201ENST00000264723 PGPEP1Q9NXJ5 209 aa15.21■□□□□ 0.02
CSPG5-201ENST00000264723 A0A1W2PPM0 123 aa15.2■□□□□ 0.02
CSPG5-201ENST00000264723 TP53TG1Q9Y2A0 90 aa15.2■□□□□ 0.02
CSPG5-201ENST00000264723 CCDC140Q96MF4 163 aa15.2■□□□□ 0.02
CSPG5-201ENST00000264723 IGKV2D-26A0A0A0MRZ7 120 aa15.2■□□□□ 0.02
CSPG5-201ENST00000264723 TRGV1A0A0A0MS02 117 aa15.19■□□□□ 0.02
CSPG5-201ENST00000264723 PLNP26678 52 aa15.19■□□□□ 0.02
CSPG5-201ENST00000264723 C19orf54Q5BKX5 351 aa15.19■□□□□ 0.02
CSPG5-201ENST00000264723 PHLDA1Q8WV24 401 aaPredicted RBP15.19■□□□□ 0.02
CSPG5-201ENST00000264723 TMEM262E9PQX1 116 aa15.19■□□□□ 0.02
CSPG5-201ENST00000264723 IGHV3-16A0A0C4DH30 117 aa15.19■□□□□ 0.02
CSPG5-201ENST00000264723 TNRC18O15417 2968 aaPredicted RBP15.19■□□□□ 0.02
CSPG5-201ENST00000264723 GAGE13Q4V321 117 aa15.19■□□□□ 0.02
CSPG5-201ENST00000264723 HOXD3P31249 432 aaPredicted RBP15.18■□□□□ 0.02
CSPG5-201ENST00000264723 TRGV11A0A075B6L2 103 aa15.18■□□□□ 0.02
CSPG5-201ENST00000264723 HIST2H2BCQ6DN03 193 aa15.18■□□□□ 0.02
CSPG5-201ENST00000264723 PRADC1Q9BSG0 188 aa15.18■□□□□ 0.02
CSPG5-201ENST00000264723 K7EP34 96 aa15.18■□□□□ 0.02
CSPG5-201ENST00000264723 JPT2Q9H910 190 aa15.18■□□□□ 0.02
CSPG5-201ENST00000264723 VPREB3Q9UKI3 123 aa15.18■□□□□ 0.02
CSPG5-201ENST00000264723 CRXO43186 299 aaPredicted RBP15.17■□□□□ 0.02
CSPG5-201ENST00000264723 PAPPA-AS1Q5QFB9 102 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 BOD1L2Q8IYS8 172 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 ODF1Q14990 250 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 HIST2H2BDQ6DRA6 164 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 ZNF493Q6ZR52 646 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 TMEM190Q8WZ59 177 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms