RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PRR9Q5T870 116 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 ZFAND2AQ8N6M9 145 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 CITED1Q99966 193 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 SNCGO76070 127 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 P0DMU3 169 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 Q6ZQT7 251 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 IGHV3-49A0A0A0MS15 119 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 A0A0B4J2C4 111 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 J3QQQ9 107 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 RHODO00212 210 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 ATP6V0E1O15342 81 aa9.38□□□□□ -0.91
CHMP2B-201ENST00000263780 C9JAW5 83 aa9.37□□□□□ -0.91
CHMP2B-201ENST00000263780 CUL9Q8IWT3 2517 aa9.37□□□□□ -0.91
CHMP2B-201ENST00000263780 NXPH4O95158 308 aa9.37□□□□□ -0.91
CHMP2B-201ENST00000263780 TSHBP01222 138 aa9.37□□□□□ -0.91
CHMP2B-201ENST00000263780 ATXN8Q156A1 80 aa9.37□□□□□ -0.91
CHMP2B-201ENST00000263780 Q6Q795 121 aa9.37□□□□□ -0.91
CHMP2B-201ENST00000263780 POLR2KP53803 58 aaKnown RBP9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 ZNF876PQ49A33 203 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 Q6ZS46 218 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 ZNF318Q5VUA4 2279 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 J3KRW8 73 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 LEPROTO15243 131 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 TTC32Q5I0X7 151 aa9.36□□□□□ -0.91
CHMP2B-201ENST00000263780 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 APRG1Q8IVJ8 170 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 AJUBAQ96IF1 538 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 C20orf173Q96LM9 149 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 A4D1N5 150 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 LINC01548A6NM66 108 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
CHMP2B-201ENST00000263780 IGF1P05019 195 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 DEFB123Q8N688 67 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 LINC01560Q8TB33 94 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE12JA6NER3 117 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE7O76087 117 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 TGFAP01135 160 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 IFITM1P13164 125 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 EMP1P54849 157 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE4Q13068 117 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 RAX2Q96IS3 184 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 AMELXQ99217 191 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
CHMP2B-201ENST00000263780 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 GATA3P23771 443 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 UBE2E1P51965 193 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 TPRP12270 2363 aaKnown RBP9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 GNRH2O43555 120 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 LINC00315P59091 139 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
CHMP2B-201ENST00000263780 ZZEF1O43149 2961 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 TRAV8-4A0A0B4J246 113 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 A0A0J9YX75 114 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 G3V318 75 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 SPRY2O43597 315 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 RHOHQ15669 191 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 MRPL23Q16540 153 aaKnown RBP9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 Q1RN00 199 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 Q8N1Y9 231 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 B5MCH6 92 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 SUMO4Q6EEV6 95 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 SIRPDQ9H106 197 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 LOC400499M0QZD8 3231 aa9.32□□□□□ -0.92
CHMP2B-201ENST00000263780 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 F5H697 171 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 NDUFA4O00483 81 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 SOCS3O14543 225 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1806 ms