RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 CIDEAO60543 219 aa12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 NPBQ8NG41 125 aa12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 K7EP34 96 aa12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
PDZRN3-201ENST00000263666 MSMBP08118 114 aa12.46□□□□□ -0.41
PDZRN3-201ENST00000263666 CDKN1BP46527 198 aa12.46□□□□□ -0.41
PDZRN3-201ENST00000263666 ACANP16112 2415 aa12.46□□□□□ -0.41
PDZRN3-201ENST00000263666 JPT2Q9H910 190 aa12.46□□□□□ -0.42
PDZRN3-201ENST00000263666 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 HOXA3O43365 443 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 ORMDL2Q53FV1 153 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 OR5A1Q8NGJ0 315 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 TRBV7-1A0A0A6YYK4 115 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 H7C1H1 209 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 SAMD13Q5VXD3 122 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 C9orf139Q6ZV77 190 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 BOD1L2Q8IYS8 172 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 CRXO43186 299 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 ODF1Q14990 250 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 SMIM2Q9BVW6 85 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 C11orf21Q9P2W6 132 aa12.45□□□□□ -0.42
PDZRN3-201ENST00000263666 TMEM238LA0A1B0GVL6 79 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 A6NJY4 79 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 OOSP1A8MZH6 123 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 PAX2Q02962 417 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 PRADC1Q9BSG0 188 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 CENPVL3A0A0U1RRI6 287 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 NDUFS8O00217 210 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 TEX29Q8N6K0 151 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 SPOCK3Q9BQ16 436 aa12.44□□□□□ -0.42
PDZRN3-201ENST00000263666 IGHV4-38-2P0DP08 117 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 CCDC140Q96MF4 163 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 IGKV3OR2-268A0A0C4DH90 116 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 IGHV4-39P01824 125 aa12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-201ENST00000263666 LINC01549A6NIU2 74 aa12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 WFDC2Q14508 124 aa12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 TSSC4Q9Y5U2 329 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 DYNLRB2Q8TF09 96 aa12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 Q96MF0 132 aa12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 A0A096LNJ9 63 aa12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 IGHV4-61A0A0C4DH41 118 aa12.42□□□□□ -0.42
PDZRN3-201ENST00000263666 ADARB2-AS1A8MUL3 147 aa12.41□□□□□ -0.42
PDZRN3-201ENST00000263666 SYNJ2BPP57105 145 aa12.41□□□□□ -0.42
PDZRN3-201ENST00000263666 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-201ENST00000263666 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
PDZRN3-201ENST00000263666 CEND1Q8N111 149 aa12.41□□□□□ -0.42
PDZRN3-201ENST00000263666 LINC01356Q8N9X3 169 aa12.41□□□□□ -0.42
PDZRN3-201ENST00000263666 OVOL1O14753 267 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 PLNP26678 52 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 SMPXQ9UHP9 88 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 PRSS29PA6NIE9 313 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 FGF6P10767 208 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 DUSP14O95147 198 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 IGLC6P0CF74 106 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 ZNF876PQ49A33 203 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 HIST2H2BDQ6DRA6 164 aa12.4□□□□□ -0.42
PDZRN3-201ENST00000263666 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 F8VRH5 84 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 LY6G5BQ8NDX9 201 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 SYT8Q8NBV8 401 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 C12orf74Q32Q52 190 aa12.39□□□□□ -0.43
PDZRN3-201ENST00000263666 F8W735 103 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 IGHV1-69DA0A0B4J2H0 117 aa12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 A0A1W2PPR1 153 aa12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 IGHV1-69P01742 117 aa12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 DUX3Q96PT4 197 aa12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 A0A087WX48 190 aa12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 MRPS12O15235 138 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 FLNBO75369 2602 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-201ENST00000263666 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
PDZRN3-201ENST00000263666 ODF3BA8MYP8 253 aa12.37□□□□□ -0.43
PDZRN3-201ENST00000263666 PRR9Q5T870 116 aa12.37□□□□□ -0.43
PDZRN3-201ENST00000263666 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
PDZRN3-201ENST00000263666 SIGMAR1Q99720 223 aa12.37□□□□□ -0.43
PDZRN3-201ENST00000263666 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-201ENST00000263666 OPRPNQ99935 248 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-201ENST00000263666 SPXQ9BT56 116 aa12.36□□□□□ -0.43
PDZRN3-201ENST00000263666 VCX2Q9H322 139 aa12.36□□□□□ -0.43
PDZRN3-201ENST00000263666 SIRPDQ9H106 197 aa12.36□□□□□ -0.43
PDZRN3-201ENST00000263666 DAZ1Q9NQZ3 744 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-201ENST00000263666 DOPEY1Q5JWR5 2465 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms