RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TRBV7-1A0A0A6YYK4 115 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 H3BUX3 64 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 TGFAP01135 160 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 CD300EQ496F6 205 aaPredicted RBP6.92□□□□□ -1.3
MSH4-201ENST00000263187 CSTL1Q9H114 145 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 IGSF10Q6WRI0 2623 aa6.92□□□□□ -1.3
MSH4-201ENST00000263187 IGHV4-61A0A0C4DH41 118 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 ATP5LO75964 103 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 HTN1P15515 57 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 C10orf99Q6UWK7 81 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 NRGNQ92686 78 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 SMIM2Q9BVW6 85 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 CHTOPQ9Y3Y2 248 aaKnown RBP6.91□□□□□ -1.3
MSH4-201ENST00000263187 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 A0A087WX48 190 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 SIVA1O15304 175 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
MSH4-201ENST00000263187 C9orf47Q6ZRZ4 202 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 ZFAND2AQ8N6M9 145 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 NACAE9PAV3 2078 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 MUC4Q99102 2169 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 NF1P21359 2839 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 EPG5Q9HCE0 2579 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 IGHV4-39P01824 125 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 GNLYP22749 145 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 RAB9AP51151 201 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
MSH4-201ENST00000263187 HIST2H2BDQ6DRA6 164 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
MSH4-201ENST00000263187 TRAV12-3A0A0B4J271 114 aa6.9□□□□□ -1.3
MSH4-201ENST00000263187 ASIPP42127 132 aa6.9□□□□□ -1.3
MSH4-201ENST00000263187 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
MSH4-201ENST00000263187 PIFOQ8TCI5 191 aa6.9□□□□□ -1.3
MSH4-201ENST00000263187 DUX5Q96PT3 197 aa6.9□□□□□ -1.3
MSH4-201ENST00000263187 RHPN1-AS1Q9BWJ2 59 aa6.9□□□□□ -1.3
MSH4-201ENST00000263187 G3V4G9 280 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.31
MSH4-201ENST00000263187 ETDBQ3ZM63 59 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 SCGB1D4Q6XE38 83 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 SVIPQ8NHG7 77 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 ZNF479Q96JC4 524 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 LINC00477Q96M19 166 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.31
MSH4-201ENST00000263187 OR11H12B2RN74 326 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 C12orf74Q32Q52 190 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 OR11H1Q8NG94 326 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 CCDC168Q8NDH2 2452 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 IGLL5B9A064 214 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 ZNF256Q9Y2P7 627 aaPredicted RBP6.89□□□□□ -1.31
MSH4-201ENST00000263187 TRAV21A0A0B4J279 112 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 H7C1H1 209 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 SLC25A16P16260 332 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
MSH4-201ENST00000263187 OPRPNQ99935 248 aaPredicted RBP6.89□□□□□ -1.31
MSH4-201ENST00000263187 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 ANKRD17O75179 2603 aaKnown RBP6.89□□□□□ -1.31
MSH4-201ENST00000263187 TEX15Q9BXT5 2789 aa6.89□□□□□ -1.31
MSH4-201ENST00000263187 APOMO95445 188 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 ZNF688P0C7X2 276 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 INSL3P51460 131 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 SRSF2Q01130 221 aaKnown RBP6.88□□□□□ -1.31
MSH4-201ENST00000263187 BBC3Q96PG8 261 aaPredicted RBP6.88□□□□□ -1.31
MSH4-201ENST00000263187 PRADC1Q9BSG0 188 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 IGHV1-69DA0A0B4J2H0 117 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 ZNF815PA8K554 130 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 F8VRH5 84 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 IGHV1-69P01742 117 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 CD7P09564 240 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 SRSF9Q13242 221 aaKnown RBP eCLIP6.88□□□□□ -1.31
MSH4-201ENST00000263187 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 ITLN2Q8WWU7 325 aaPredicted RBP6.88□□□□□ -1.31
MSH4-201ENST00000263187 BAALCQ8WXS3 180 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 U3KQE9 123 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 PRM2P04554 102 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
MSH4-201ENST00000263187 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 KLK9Q9UKQ9 250 aa6.88□□□□□ -1.31
MSH4-201ENST00000263187 JMJD1CQ15652 2540 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 OR5A1Q8NGJ0 315 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 SMPXQ9UHP9 88 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 TP53TG1Q9Y2A0 90 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 CHD6Q8TD26 2715 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 IGHV3-73A0A0B4J1V6 119 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 PLNP26678 52 aa6.87□□□□□ -1.31
MSH4-201ENST00000263187 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
MSH4-201ENST00000263187 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms