RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SBSPONQ8IVN8 264 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 PCNX1Q96RV3 2341 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
XRCC1-201ENST00000262887 Q6ZQT7 251 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 RASL10AQ92737 203 aa11.45□□□□□ -0.58
XRCC1-201ENST00000262887 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 C2orf66Q6UXQ4 117 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 ITPR1Q14643 2758 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 B9A039 149 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 SPANXA1Q9NS26 97 aa11.44□□□□□ -0.58
XRCC1-201ENST00000262887 TTC32Q5I0X7 151 aa11.43□□□□□ -0.58
XRCC1-201ENST00000262887 MSRB2Q9Y3D2 182 aa11.43□□□□□ -0.58
XRCC1-201ENST00000262887 IFITM1P13164 125 aa11.43□□□□□ -0.58
XRCC1-201ENST00000262887 AJUBAQ96IF1 538 aa11.43□□□□□ -0.58
XRCC1-201ENST00000262887 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
XRCC1-201ENST00000262887 TGFAP01135 160 aa11.42□□□□□ -0.58
XRCC1-201ENST00000262887 VPREB3Q9UKI3 123 aa11.42□□□□□ -0.58
XRCC1-201ENST00000262887 MAP1AP78559 2803 aaPredicted RBP11.42□□□□□ -0.58
XRCC1-201ENST00000262887 M0R381 172 aa11.42□□□□□ -0.58
XRCC1-201ENST00000262887 C15orf32Q32M92 178 aa11.42□□□□□ -0.58
XRCC1-201ENST00000262887 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
XRCC1-201ENST00000262887 A0A0J9YY99 117 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 LY6G5BQ8NDX9 201 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 PIEZO1Q92508 2521 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 TRAV8-2A0A0B4J237 113 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 CFC1BP0CG36 223 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 CFC1P0CG37 223 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 PIP4P1Q86T03 277 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 SNCGO76070 127 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 C10orf126Q8N4M7 172 aa11.41□□□□□ -0.58
XRCC1-201ENST00000262887 HERVK_113P61574 105 aa11.4□□□□□ -0.58
XRCC1-201ENST00000262887 SPRY2O43597 315 aa11.4□□□□□ -0.59
XRCC1-201ENST00000262887 ASIPP42127 132 aa11.4□□□□□ -0.59
XRCC1-201ENST00000262887 FAM159AQ6UWV7 190 aa11.4□□□□□ -0.59
XRCC1-201ENST00000262887 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.59
XRCC1-201ENST00000262887 IGHV7-81A0A0B4J1V7 117 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 ODF3BA8MYP8 253 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 C14orf178Q8N769 122 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-201ENST00000262887 COL6A6A6NMZ7 2263 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 CLPSL1A2RUU4 121 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 IGHV3-30P01768 117 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 MGPP08493 103 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 IGHV3-30-5P0DP03 117 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 Q6Q795 121 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 PPDPFQ9H3Y8 114 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 DPH3P1Q9H4G8 78 aa11.39□□□□□ -0.59
XRCC1-201ENST00000262887 C11orf86A6NJI1 115 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 CD3EP07766 207 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 PRR9Q5T870 116 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 MRPL53Q96EL3 112 aaKnown RBP11.38□□□□□ -0.59
XRCC1-201ENST00000262887 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.38□□□□□ -0.59
XRCC1-201ENST00000262887 SLC25A20O43772 301 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 CRYGDP07320 174 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
XRCC1-201ENST00000262887 ECSCRQ19T08 205 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 Q6ZS46 218 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 ZFYVE26Q68DK2 2539 aa11.38□□□□□ -0.59
XRCC1-201ENST00000262887 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 EMP1P54849 157 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 PAPPA-AS1Q5QFB9 102 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 POLEQ07864 2286 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 M0QXV9 152 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 CLEC19AQ6UXS0 136 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 Q8N6K4 173 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 SLC25A29Q8N8R3 303 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 DCHS2Q6V1P9 2916 aa11.37□□□□□ -0.59
XRCC1-201ENST00000262887 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 CRLF1O75462 422 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
XRCC1-201ENST00000262887 METTL26Q96S19 204 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 PHLDA3Q9Y5J5 127 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 WNK2Q9Y3S1 2297 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 C9JAW5 83 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 ARHGAP32A7KAX9 2087 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 PTPRQQ9UMZ3 2332 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 M0R1W7 72 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 LY6HO94772 140 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 ATP5J2P56134 94 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 FAM110DQ8TAY7 271 aaPredicted RBP11.36□□□□□ -0.59
XRCC1-201ENST00000262887 C16orf92Q96LL3 132 aa11.36□□□□□ -0.59
XRCC1-201ENST00000262887 IGF1P05019 195 aa11.35□□□□□ -0.59
XRCC1-201ENST00000262887 TIMD4Q96H15 378 aa11.35□□□□□ -0.59
XRCC1-201ENST00000262887 TSPEAR-AS2P59090 65 aa11.34□□□□□ -0.59
XRCC1-201ENST00000262887 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
XRCC1-201ENST00000262887 TSHBP01222 138 aa11.34□□□□□ -0.59
XRCC1-201ENST00000262887 PRR30Q53SZ7 412 aaPredicted RBP11.34□□□□□ -0.59
XRCC1-201ENST00000262887 Q8N9W7 124 aa11.34□□□□□ -0.59
XRCC1-201ENST00000262887 PPP1R17O96001 155 aa11.33□□□□□ -0.6
XRCC1-201ENST00000262887 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms