RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 OVOL2Q9BRP0 275 aa12.4□□□□□ -0.42
SHANK3-201ENST00000262795 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
SHANK3-201ENST00000262795 TRBV19A0A075B6N1 114 aa12.4□□□□□ -0.42
SHANK3-201ENST00000262795 C9orf118A6NHY6 69 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 H3BRN7 92 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 K7EP13 123 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 IGHV4-31P0DP07 118 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 H3BMG7 143 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 FGF6P10767 208 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 DEFB1P60022 68 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 TRAV4A0A0B4J268 109 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 LECT2O14960 151 aa12.39□□□□□ -0.43
SHANK3-201ENST00000262795 MRPL36Q9P0J6 103 aaKnown RBP12.39□□□□□ -0.43
SHANK3-201ENST00000262795 IGHG2P01859 326 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 WT1-ASQ06250 92 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 PDE6HQ13956 83 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 MPLKIPQ8TAP9 179 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 C2orf70A6NJV1 201 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 COX7A2LO14548 114 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 LHFPL1Q86WI0 220 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 DYNAPQ8N1N2 210 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 LINC01549A6NIU2 74 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 PPDPFLQ8WWR9 84 aa12.38□□□□□ -0.43
SHANK3-201ENST00000262795 UBE2D1P51668 147 aa12.37□□□□□ -0.43
SHANK3-201ENST00000262795 TMEM141Q96I45 108 aa12.37□□□□□ -0.43
SHANK3-201ENST00000262795 NOTCH3Q9UM47 2321 aa12.37□□□□□ -0.43
SHANK3-201ENST00000262795 K7EMI3 77 aa12.37□□□□□ -0.43
SHANK3-201ENST00000262795 PRSS47A8MTI9 375 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 NDUFA11Q86Y39 141 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 C5orf56Q8N8D9 126 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 PYGO2Q9BRQ0 406 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 DEFB131BA0A096LNP1 70 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 VOPP1Q96AW1 172 aa12.36□□□□□ -0.43
SHANK3-201ENST00000262795 CARD19Q96LW7 228 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 WISP2O76076 250 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 HERVK_113P63121 156 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
SHANK3-201ENST00000262795 A0A087WZ39 114 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 H3BUA1 57 aa12.35□□□□□ -0.43
SHANK3-201ENST00000262795 LYL1P12980 280 aa12.34□□□□□ -0.43
SHANK3-201ENST00000262795 MRPL51Q4U2R6 128 aaKnown RBP12.34□□□□□ -0.43
SHANK3-201ENST00000262795 TRAV1-1A0A0B4J248 108 aa12.34□□□□□ -0.43
SHANK3-201ENST00000262795 HEATR5AQ86XA9 2040 aa12.34□□□□□ -0.43
SHANK3-201ENST00000262795 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
SHANK3-201ENST00000262795 CRYGDP07320 174 aa12.34□□□□□ -0.43
SHANK3-201ENST00000262795 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
SHANK3-201ENST00000262795 VSIG2Q96IQ7 327 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 EML6Q6ZMW3 1958 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 IGHV7-81A0A0B4J1V7 117 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 K7EP34 96 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 CCL25O15444 150 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 INAFM2P0DMQ5 153 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 DAZAP2Q15038 168 aaPredicted RBP12.33□□□□□ -0.44
SHANK3-201ENST00000262795 A0A1W2PNU3 283 aaPredicted RBP12.33□□□□□ -0.44
SHANK3-201ENST00000262795 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 IGF1P05019 195 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 IGLC2P0DOY2 106 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 ZNF726P1Q15940 193 aa12.33□□□□□ -0.44
SHANK3-201ENST00000262795 BVES-AS1Q5T3Y7 98 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 F8W1H4 67 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 C18orf32Q8TCD1 76 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 NOTCH4Q99466 2003 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 IGKV1-17P01599 117 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 SPANXA1Q9NS26 97 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 MUC6Q6W4X9 2439 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 ANAPC1Q9H1A4 1944 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 UBE2D4Q9Y2X8 147 aa12.32□□□□□ -0.44
SHANK3-201ENST00000262795 C15orf65H3BRN8 121 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 QRFPP83859 136 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 H0Y9J4 135 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 Q8NA96 180 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 C20orf144Q9BQM9 153 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 TNRC6AQ8NDV7 1962 aaKnown RBP12.31□□□□□ -0.44
SHANK3-201ENST00000262795 PTPRQQ9UMZ3 2332 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 TMEM131Q92545 1883 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 ACYP1P07311 99 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 PCNX2A6NKB5 2137 aa12.31□□□□□ -0.44
SHANK3-201ENST00000262795 CEND1Q8N111 149 aa12.3□□□□□ -0.44
SHANK3-201ENST00000262795 ZNF524Q96C55 264 aa12.3□□□□□ -0.44
SHANK3-201ENST00000262795 Q9H8V8 135 aa12.3□□□□□ -0.44
SHANK3-201ENST00000262795 UTF1Q5T230 341 aa12.3□□□□□ -0.44
SHANK3-201ENST00000262795 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
SHANK3-201ENST00000262795 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
SHANK3-201ENST00000262795 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
SHANK3-201ENST00000262795 ZFHX2Q9C0A1 2572 aaPredicted RBP12.29□□□□□ -0.44
SHANK3-201ENST00000262795 OR11H6Q8NGC7 330 aa12.29□□□□□ -0.44
SHANK3-201ENST00000262795 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
SHANK3-201ENST00000262795 LINC00311Q8N616 119 aa12.29□□□□□ -0.44
SHANK3-201ENST00000262795 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms