RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 OSTCQ9NRP0 149 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 XKRY2A2RUG3 117 aa11.78□□□□□ -0.52
CHCHD3-201ENST00000262570 GATCO43716 136 aaKnown RBP11.78□□□□□ -0.52
CHCHD3-201ENST00000262570 MED14OSP0DP75 135 aa11.78□□□□□ -0.52
CHCHD3-201ENST00000262570 GZMBP10144 247 aa11.78□□□□□ -0.52
CHCHD3-201ENST00000262570 ADCYAP1P18509 176 aa11.78□□□□□ -0.52
CHCHD3-201ENST00000262570 SSBP4Q9BWG4 385 aaPredicted RBP11.78□□□□□ -0.52
CHCHD3-201ENST00000262570 ZNF876PQ49A33 203 aa11.77□□□□□ -0.53
CHCHD3-201ENST00000262570 PHLDA1Q8WV24 401 aaPredicted RBP11.77□□□□□ -0.53
CHCHD3-201ENST00000262570 SFRP2Q96HF1 295 aa11.77□□□□□ -0.53
CHCHD3-201ENST00000262570 MUC4Q99102 2169 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 TRGV2A0A075B6R0 118 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 F8W036 122 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 SNAI2O43623 268 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 OR5AL1P0C617 328 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 IGLC6P0CF74 106 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 CT83Q5H943 113 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
CHCHD3-201ENST00000262570 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 NDUFAF3Q9BU61 184 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 PHLDA3Q9Y5J5 127 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 ATP5G1P05496 136 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 V9GYV3 84 aa11.75□□□□□ -0.53
CHCHD3-201ENST00000262570 DEFB131BA0A096LNP1 70 aa11.74□□□□□ -0.53
CHCHD3-201ENST00000262570 A0A1W2PPQ1 181 aa11.74□□□□□ -0.53
CHCHD3-201ENST00000262570 A8MWL6 223 aa11.74□□□□□ -0.53
CHCHD3-201ENST00000262570 POM121L12Q8N7R1 296 aa11.74□□□□□ -0.53
CHCHD3-201ENST00000262570 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
CHCHD3-201ENST00000262570 OR10AG1Q8NH19 301 aa11.74□□□□□ -0.53
CHCHD3-201ENST00000262570 DYNC2H1Q8NCM8 4307 aaKnown RBP11.73□□□□□ -0.53
CHCHD3-201ENST00000262570 C3orf84H3BNL1 204 aa11.73□□□□□ -0.53
CHCHD3-201ENST00000262570 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
CHCHD3-201ENST00000262570 CEMP1Q6PRD7 247 aaPredicted RBP11.73□□□□□ -0.53
CHCHD3-201ENST00000262570 GTSF1Q8WW33 167 aa11.73□□□□□ -0.53
CHCHD3-201ENST00000262570 NXPH4O95158 308 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 HTN3P15516 51 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 ZFAND6Q6FIF0 208 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 ZFP82Q8N141 532 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 PLECQ15149 4684 aaKnown RBP11.72□□□□□ -0.53
CHCHD3-201ENST00000262570 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 MUC21A0A0G2JKD1 596 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 MUC21A0A140T8X8 626 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 F2Z2F3 143 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 M0R381 172 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 LYZL1Q6UWQ5 148 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 ZNF479Q96JC4 524 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 GFRA4Q9GZZ7 299 aa11.71□□□□□ -0.53
CHCHD3-201ENST00000262570 FAM231BA6NCW3 169 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 RS1O15537 224 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 IGHV3-53P01767 116 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 HOXA5P20719 270 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 CTRLP40313 264 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 CASC10Q5T4H9 136 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 CFAP126Q5VTH2 177 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.54
CHCHD3-201ENST00000262570 A8MWV9 139 aa11.7□□□□□ -0.54
CHCHD3-201ENST00000262570 F5H768 121 aa11.7□□□□□ -0.54
CHCHD3-201ENST00000262570 CNFNQ9BYD5 112 aa11.7□□□□□ -0.54
CHCHD3-201ENST00000262570 JPT2Q9H910 190 aa11.7□□□□□ -0.54
CHCHD3-201ENST00000262570 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
CHCHD3-201ENST00000262570 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
CHCHD3-201ENST00000262570 RNF212Q495C1 297 aa11.69□□□□□ -0.54
CHCHD3-201ENST00000262570 WDR73Q6P4I2 378 aa11.69□□□□□ -0.54
CHCHD3-201ENST00000262570 SLC7A5P1Q8MH63 180 aa11.69□□□□□ -0.54
CHCHD3-201ENST00000262570 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
CHCHD3-201ENST00000262570 PPP1R2P9O14990 202 aa11.68□□□□□ -0.54
CHCHD3-201ENST00000262570 SSTP61278 116 aa11.68□□□□□ -0.54
CHCHD3-201ENST00000262570 CACNG7P62955 275 aa11.68□□□□□ -0.54
CHCHD3-201ENST00000262570 FHL2Q14192 279 aa11.68□□□□□ -0.54
CHCHD3-201ENST00000262570 KLK5Q9Y337 293 aaPredicted RBP11.68□□□□□ -0.54
CHCHD3-201ENST00000262570 CIDEAO60543 219 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 MT-ND4LP03901 98 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 NDUFA5Q16718 116 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 UFSP1Q6NVU6 142 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 ANAPC16Q96DE5 110 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 SAMD10Q9BYL1 202 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 IGLL5B9A064 214 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 CRYGDP07320 174 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 NTF3P20783 257 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 ZFP2Q6ZN57 461 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 FAM210BQ96KR6 192 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 PGLYRP4Q96LB8 373 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 MSRB1Q9NZV6 116 aa11.67□□□□□ -0.54
CHCHD3-201ENST00000262570 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
CHCHD3-201ENST00000262570 TMEM88Q6PEY1 159 aa11.66□□□□□ -0.54
CHCHD3-201ENST00000262570 NUP35Q8NFH5 326 aa11.66□□□□□ -0.54
CHCHD3-201ENST00000262570 HHLA3Q9XRX5 114 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms