RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 C11orf86A6NJI1 115 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 ASIPP42127 132 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 CRIP2P52943 208 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 Q6ZS46 218 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 GNRH2O43555 120 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 SPRY4Q9C004 299 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 A4D1N5 150 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 CEACAM4O75871 244 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
PRPF40B-201ENST00000261897 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.44
PRPF40B-201ENST00000261897 TIMD4Q96H15 378 aa12.27□□□□□ -0.44
PRPF40B-201ENST00000261897 JPT2Q9H910 190 aa12.27□□□□□ -0.44
PRPF40B-201ENST00000261897 TRBV7-3A0A075B6L6 115 aa12.27□□□□□ -0.45
PRPF40B-201ENST00000261897 TEX49A0A1B0GTD5 131 aa12.27□□□□□ -0.45
PRPF40B-201ENST00000261897 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-201ENST00000261897 MEIG1Q5JSS6 88 aa12.27□□□□□ -0.45
PRPF40B-201ENST00000261897 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-201ENST00000261897 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.45
PRPF40B-201ENST00000261897 CD3EP07766 207 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 IFITM1P13164 125 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 C2orf82Q6UX34 121 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 CARD19Q96LW7 228 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 SPXQ9BT56 116 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 INS-IGF2F8WCM5 200 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 MBD3L4A6NDZ8 208 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 MBD3L3A6NE82 208 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 MBD3L5A6NJ08 208 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 TMEM219Q86XT9 240 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 MBD3L2Q8NHZ7 208 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 BAALCQ8WXS3 180 aa12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-201ENST00000261897 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
PRPF40B-201ENST00000261897 MRGPRG-AS1Q2M3A8 158 aa12.25□□□□□ -0.45
PRPF40B-201ENST00000261897 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
PRPF40B-201ENST00000261897 CTSGP08311 255 aa12.25□□□□□ -0.45
PRPF40B-201ENST00000261897 LINC00311Q8N616 119 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 PRO0461Q9UI25 63 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 CRLF1O75462 422 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 E7EQL1 145 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 CD7P09564 240 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 ZNF625Q96I27 306 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 DUX3Q96PT4 197 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 SMAD5-AS1Q9Y6J3 95 aa12.24□□□□□ -0.45
PRPF40B-201ENST00000261897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-201ENST00000261897 A0A0G2JNJ9 132 aa12.23□□□□□ -0.45
PRPF40B-201ENST00000261897 Q9UFV3 132 aa12.23□□□□□ -0.45
PRPF40B-201ENST00000261897 SHISA9B4DS77 424 aa12.23□□□□□ -0.45
PRPF40B-201ENST00000261897 AJUBAQ96IF1 538 aa12.23□□□□□ -0.45
PRPF40B-201ENST00000261897 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
PRPF40B-201ENST00000261897 CDX4O14627 284 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 RASL10AQ92737 203 aa12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 IGLV1-47P01700 117 aa12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 C10orf126Q8N4M7 172 aa12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 J3QQQ9 107 aa12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 NDUFV3P56181 108 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-201ENST00000261897 RBAKDNA6NC62 111 aa12.21□□□□□ -0.45
PRPF40B-201ENST00000261897 LINC00574Q9H8X3 128 aa12.21□□□□□ -0.45
PRPF40B-201ENST00000261897 CFC1BP0CG36 223 aa12.21□□□□□ -0.46
PRPF40B-201ENST00000261897 CFC1P0CG37 223 aa12.21□□□□□ -0.46
PRPF40B-201ENST00000261897 CUL9Q8IWT3 2517 aa12.21□□□□□ -0.46
PRPF40B-201ENST00000261897 ZMAT4Q9H898 229 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 COX6CP09669 75 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 LY6EQ16553 131 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 DAND5Q8N907 189 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 NRACQ8N912 160 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 SLC50A1Q9BRV3 221 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 KLRB1Q12918 225 aa12.2□□□□□ -0.46
PRPF40B-201ENST00000261897 MUSTN1Q8IVN3 82 aa12.19□□□□□ -0.46
PRPF40B-201ENST00000261897 Q8N1Y9 231 aa12.19□□□□□ -0.46
PRPF40B-201ENST00000261897 GATD1Q8NB37 220 aa12.19□□□□□ -0.46
PRPF40B-201ENST00000261897 OVOL3O00110 214 aa12.19□□□□□ -0.46
PRPF40B-201ENST00000261897 ZNF672Q499Z4 452 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-201ENST00000261897 FAM208BQ5VWN6 2430 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 ATP6V0E1O15342 81 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 PAX8Q06710 450 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 LINC01559Q495D7 138 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 CITED1Q99966 193 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 H3BMM0 161 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 PF4V1P10720 104 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
PRPF40B-201ENST00000261897 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 FOXC1Q12948 553 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 VCX2Q9H322 139 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 CACNA1AO00555 2505 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 A0A0J9YY99 117 aa12.17□□□□□ -0.46
PRPF40B-201ENST00000261897 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms