RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 UQCR10Q9UDW1 63 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 SELENOKQ9Y6D0 94 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 A0A1B0GV90 55 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 H3BVH4 76 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 K7EQG2 157 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 EVI2AP22794 236 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 PROK1P58294 105 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 ADAMTSL5Q6ZMM2 481 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 NRACQ8N912 160 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 LOC389332A0A1B0GUA5 103 aa13.18□□□□□ -0.3
SSB-201ENST00000260956 PRSS47A8MTI9 375 aa13.18□□□□□ -0.3
SSB-201ENST00000260956 M0R143 59 aa13.18□□□□□ -0.3
SSB-201ENST00000260956 NXPH4O95158 308 aa13.18□□□□□ -0.3
SSB-201ENST00000260956 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
SSB-201ENST00000260956 MAP1LC3CQ9BXW4 147 aa13.18□□□□□ -0.3
SSB-201ENST00000260956 IGKV3-7A0A075B6H7 116 aa13.17□□□□□ -0.3
SSB-201ENST00000260956 TNFRSF6BO95407 300 aa13.17□□□□□ -0.3
SSB-201ENST00000260956 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
SSB-201ENST00000260956 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
SSB-201ENST00000260956 C12orf54Q6X4T0 127 aa13.17□□□□□ -0.3
SSB-201ENST00000260956 ODF3Q96PU9 254 aa13.17□□□□□ -0.3
SSB-201ENST00000260956 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
SSB-201ENST00000260956 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
SSB-201ENST00000260956 ANXA2RQ3ZCQ2 193 aa13.16□□□□□ -0.3
SSB-201ENST00000260956 KLHDC1Q8N7A1 406 aa13.16□□□□□ -0.3
SSB-201ENST00000260956 HBDP02042 147 aa13.16□□□□□ -0.3
SSB-201ENST00000260956 RNASE3P12724 160 aaKnown RBP13.16□□□□□ -0.3
SSB-201ENST00000260956 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
SSB-201ENST00000260956 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
SSB-201ENST00000260956 MAP1LC3AQ9H492 121 aa13.16□□□□□ -0.3
SSB-201ENST00000260956 ID1P41134 155 aa13.15□□□□□ -0.3
SSB-201ENST00000260956 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
SSB-201ENST00000260956 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
SSB-201ENST00000260956 ST20Q9HBF5 79 aa13.15□□□□□ -0.3
SSB-201ENST00000260956 J3KRW8 73 aa13.14□□□□□ -0.31
SSB-201ENST00000260956 RNASE4P34096 147 aaKnown RBP13.14□□□□□ -0.31
SSB-201ENST00000260956 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
SSB-201ENST00000260956 A0A0J9YX75 114 aa13.13□□□□□ -0.31
SSB-201ENST00000260956 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
SSB-201ENST00000260956 MUC4Q99102 2169 aa13.13□□□□□ -0.31
SSB-201ENST00000260956 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
SSB-201ENST00000260956 ASIPP42127 132 aa13.13□□□□□ -0.31
SSB-201ENST00000260956 POM121L12Q8N7R1 296 aa13.13□□□□□ -0.31
SSB-201ENST00000260956 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
SSB-201ENST00000260956 NXT2Q9NPJ8 142 aaKnown RBP13.13□□□□□ -0.31
SSB-201ENST00000260956 TSPOP30536 169 aa13.12□□□□□ -0.31
SSB-201ENST00000260956 NUTF2P61970 127 aaKnown RBP13.12□□□□□ -0.31
SSB-201ENST00000260956 SPANXN1Q5VSR9 72 aa13.12□□□□□ -0.31
SSB-201ENST00000260956 Q8N8P6 123 aa13.12□□□□□ -0.31
SSB-201ENST00000260956 ZNF688P0C7X2 276 aa13.11□□□□□ -0.31
SSB-201ENST00000260956 FXYD7P58549 80 aa13.11□□□□□ -0.31
SSB-201ENST00000260956 LGALS9BQ3B8N2 356 aa13.11□□□□□ -0.31
SSB-201ENST00000260956 LGALS9CQ6DKI2 356 aa13.11□□□□□ -0.31
SSB-201ENST00000260956 MRAP2Q96G30 205 aa13.11□□□□□ -0.31
SSB-201ENST00000260956 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
SSB-201ENST00000260956 TRAV26-2A0A0B4J265 109 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 SPRY2O43597 315 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 WFDC3Q8IUB2 231 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 C11orf44Q8N8P7 122 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 CITED1Q99966 193 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 A8MTW9 85 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 GNRH2O43555 120 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 FCER1GP30273 86 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 Q6ZN92 141 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
SSB-201ENST00000260956 LINC00315P59091 139 aa13.09□□□□□ -0.31
SSB-201ENST00000260956 C4orf3Q8WVX3 66 aa13.09□□□□□ -0.31
SSB-201ENST00000260956 PMCHL2Q9BQD1 86 aa13.09□□□□□ -0.31
SSB-201ENST00000260956 WNK1Q9H4A3 2382 aa13.09□□□□□ -0.31
SSB-201ENST00000260956 MGAM2Q2M2H8 2515 aa13.09□□□□□ -0.31
SSB-201ENST00000260956 NBEAL1Q6ZS30 2694 aa13.08□□□□□ -0.31
SSB-201ENST00000260956 C7orf71A4D174 169 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 HNRNPA3P51991 378 aaKnown RBP13.08□□□□□ -0.32
SSB-201ENST00000260956 SLURP1P55000 103 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 SMIM15Q7Z3B0 74 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 LEPP41159 167 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 TFPI2P48307 235 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 RASL10AQ92737 203 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 DPF1Q92782 380 aa13.08□□□□□ -0.32
SSB-201ENST00000260956 M0R381 172 aa13.07□□□□□ -0.32
SSB-201ENST00000260956 CD28P10747 220 aa13.07□□□□□ -0.32
SSB-201ENST00000260956 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
SSB-201ENST00000260956 DPH3P1Q9H4G8 78 aa13.07□□□□□ -0.32
SSB-201ENST00000260956 TIMM8BQ9Y5J9 83 aaPredicted RBP13.07□□□□□ -0.32
SSB-201ENST00000260956 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
SSB-201ENST00000260956 LINC00469Q8N7U9 141 aa13.06□□□□□ -0.32
SSB-201ENST00000260956 C9orf85Q96MD7 179 aa13.06□□□□□ -0.32
SSB-201ENST00000260956 CMYA5Q8N3K9 4069 aa13.06□□□□□ -0.32
SSB-201ENST00000260956 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
SSB-201ENST00000260956 LINC01619G3V211 115 aa13.05□□□□□ -0.32
SSB-201ENST00000260956 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
SSB-201ENST00000260956 SMIM2Q9BVW6 85 aa13.05□□□□□ -0.32
SSB-201ENST00000260956 PHLDA3Q9Y5J5 127 aa13.05□□□□□ -0.32
SSB-201ENST00000260956 AGRNO00468 2067 aa13.05□□□□□ -0.32
SSB-201ENST00000260956 H0Y8G0 127 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms