RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 IGHV3-16A0A0C4DH30 117 aa14.89□□□□□ -0.03
RTCA-201ENST00000260563 H3BVH4 76 aa14.89□□□□□ -0.03
RTCA-201ENST00000260563 PRM2P04554 102 aa14.89□□□□□ -0.03
RTCA-201ENST00000260563 DEFB4AO15263 64 aa14.88□□□□□ -0.03
RTCA-201ENST00000260563 ARMS2P0C7Q2 107 aa14.88□□□□□ -0.03
RTCA-201ENST00000260563 MED14OSP0DP75 135 aa14.88□□□□□ -0.03
RTCA-201ENST00000260563 RNASE3P12724 160 aaKnown RBP14.88□□□□□ -0.03
RTCA-201ENST00000260563 LYZL1Q6UWQ5 148 aa14.88□□□□□ -0.03
RTCA-201ENST00000260563 YPEL4Q96NS1 127 aa14.88□□□□□ -0.03
RTCA-201ENST00000260563 TRAV9-1A0A075B6T8 112 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 CTRLP40313 264 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 TMEM263Q8WUH6 116 aaKnown RBP14.87□□□□□ -0.03
RTCA-201ENST00000260563 C16orf74Q96GX8 76 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 BTF3L4Q96K17 158 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 SSBP4Q9BWG4 385 aaPredicted RBP14.87□□□□□ -0.03
RTCA-201ENST00000260563 MDFICQ9P1T7 246 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 F2Z2F3 143 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 SNAI2O43623 268 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 OR5AL1P0C617 328 aa14.87□□□□□ -0.03
RTCA-201ENST00000260563 TIMM8BQ9Y5J9 83 aaPredicted RBP14.87□□□□□ -0.03
RTCA-201ENST00000260563 STAB2Q8WWQ8 2551 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 TGIF2-C20orf24A0A0A6YYL0 155 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 SPINK4O60575 86 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 AZU1P20160 251 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 RNASE8Q8TDE3 154 aaKnown RBP14.86□□□□□ -0.03
RTCA-201ENST00000260563 BORCS7Q96B45 105 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 EDA2RQ9HAV5 297 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 SCRT2Q9NQ03 307 aa14.86□□□□□ -0.03
RTCA-201ENST00000260563 EMP1P54849 157 aa14.85□□□□□ -0.03
RTCA-201ENST00000260563 ZNF415Q09FC8 603 aa14.85□□□□□ -0.03
RTCA-201ENST00000260563 ZNF493Q6ZR52 646 aa14.85□□□□□ -0.03
RTCA-201ENST00000260563 C9orf85Q96MD7 179 aa14.85□□□□□ -0.03
RTCA-201ENST00000260563 TRBV24-1A0A075B6N3 115 aa14.84□□□□□ -0.03
RTCA-201ENST00000260563 C11orf72Q8NBR9 251 aa14.84□□□□□ -0.03
RTCA-201ENST00000260563 PHLDA3Q9Y5J5 127 aa14.84□□□□□ -0.03
RTCA-201ENST00000260563 MUC21A0A0G2JKD1 596 aa14.83□□□□□ -0.04
RTCA-201ENST00000260563 MUC21A0A140T8X8 626 aa14.83□□□□□ -0.04
RTCA-201ENST00000260563 A0A1B0GUT8 65 aa14.83□□□□□ -0.04
RTCA-201ENST00000260563 MRPL54Q6P161 138 aaKnown RBP14.83□□□□□ -0.04
RTCA-201ENST00000260563 OR10AG1Q8NH19 301 aa14.83□□□□□ -0.04
RTCA-201ENST00000260563 CNFNQ9BYD5 112 aa14.83□□□□□ -0.04
RTCA-201ENST00000260563 GSN-AS1Q9NRJ2 163 aa14.83□□□□□ -0.04
RTCA-201ENST00000260563 COLCA2A8K830 154 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 ATP5L2Q7Z4Y8 100 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 SNURFLB1AK76 121 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 SSTP61278 116 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 CACNG7P62955 275 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 RIGQ13278 110 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 SPANXN1Q5VSR9 72 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 WDR73Q6P4I2 378 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 FAM210BQ96KR6 192 aa14.82□□□□□ -0.04
RTCA-201ENST00000260563 PLAC8L1A1L4L8 177 aa14.81□□□□□ -0.04
RTCA-201ENST00000260563 IGHV4-4A0A075B6R2 117 aa14.8□□□□□ -0.04
RTCA-201ENST00000260563 TEX48A0A1B0GUV7 120 aa14.8□□□□□ -0.04
RTCA-201ENST00000260563 NTF3P20783 257 aa14.8□□□□□ -0.04
RTCA-201ENST00000260563 TWIST1Q15672 202 aa14.8□□□□□ -0.04
RTCA-201ENST00000260563 CELA1Q9UNI1 258 aa14.8□□□□□ -0.04
RTCA-201ENST00000260563 A0A1B0GXF2 115 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 M0R381 172 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 HBBP68871 147 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 ZFP82Q8N141 532 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 IL17DQ8TAD2 202 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 WWC2-AS2Q96NR7 200 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 SPXQ9BT56 116 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 DNAH7Q8WXX0 4024 aa14.79□□□□□ -0.04
RTCA-201ENST00000260563 A0A1B0GW15 77 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 NXPH4O95158 308 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 CAMPP49913 170 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 FAM222AQ5U5X8 452 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 RASL11AQ6T310 242 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 C11orf45Q8TAV5 145 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 DKK2Q9UBU2 259 aa14.78□□□□□ -0.04
RTCA-201ENST00000260563 LYRM9A8MSI8 78 aa14.77□□□□□ -0.04
RTCA-201ENST00000260563 SPART-AS1P0CW21 52 aa14.77□□□□□ -0.04
RTCA-201ENST00000260563 DMRTA1Q5VZB9 504 aa14.77□□□□□ -0.04
RTCA-201ENST00000260563 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.77□□□□□ -0.04
RTCA-201ENST00000260563 SYT8Q8NBV8 401 aa14.77□□□□□ -0.04
RTCA-201ENST00000260563 NOP10Q9NPE3 64 aaKnown RBP14.77□□□□□ -0.04
RTCA-201ENST00000260563 MSRB1Q9NZV6 116 aa14.77□□□□□ -0.04
RTCA-201ENST00000260563 M0R2P5 195 aa14.76□□□□□ -0.05
RTCA-201ENST00000260563 S100A8P05109 93 aa14.76□□□□□ -0.05
RTCA-201ENST00000260563 ZNF876PQ49A33 203 aa14.76□□□□□ -0.05
RTCA-201ENST00000260563 PTH2Q96A98 100 aa14.76□□□□□ -0.05
RTCA-201ENST00000260563 RAB5AP20339 215 aa14.75□□□□□ -0.05
RTCA-201ENST00000260563 DAZ2Q13117 558 aaKnown RBP14.75□□□□□ -0.05
RTCA-201ENST00000260563 COX19Q49B96 90 aa14.75□□□□□ -0.05
RTCA-201ENST00000260563 NANOS2P60321 138 aaKnown RBP14.74□□□□□ -0.05
RTCA-201ENST00000260563 RAB4BP61018 213 aa14.74□□□□□ -0.05
RTCA-201ENST00000260563 TRGC1P0CF51 173 aa14.73□□□□□ -0.05
RTCA-201ENST00000260563 TMEM136Q6ZRR5 245 aa14.73□□□□□ -0.05
RTCA-201ENST00000260563 GATD1Q8NB37 220 aa14.73□□□□□ -0.05
RTCA-201ENST00000260563 GNB1LQ9BYB4 327 aa14.73□□□□□ -0.05
RTCA-201ENST00000260563 MRPL16Q9NX20 251 aaKnown RBP14.73□□□□□ -0.05
RTCA-201ENST00000260563 RPS10P46783 165 aaKnown RBP14.72□□□□□ -0.05
RTCA-201ENST00000260563 DAD1P61803 113 aa14.72□□□□□ -0.05
RTCA-201ENST00000260563 LGALS9BQ3B8N2 356 aa14.72□□□□□ -0.05
RTCA-201ENST00000260563 PIK3CD-AS1Q5SR53 167 aa14.72□□□□□ -0.05
RTCA-201ENST00000260563 MUC4Q99102 2169 aa14.72□□□□□ -0.05
RTCA-201ENST00000260563 TRGV1A0A0A0MS02 117 aa14.71□□□□□ -0.05
RTCA-201ENST00000260563 SMIM15Q7Z3B0 74 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms