RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
KCTD3-201ENST00000259154 H3BRN7 92 aa11.61□□□□□ -0.55
KCTD3-201ENST00000259154 ODF1Q14990 250 aa11.61□□□□□ -0.55
KCTD3-201ENST00000259154 IGLV1-44P01699 117 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 EIF4EBP1Q13541 118 aaPredicted RBP11.6□□□□□ -0.55
KCTD3-201ENST00000259154 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 ZNF48Q96MX3 618 aaPredicted RBP11.6□□□□□ -0.55
KCTD3-201ENST00000259154 SLC25A20O43772 301 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 OR11H6Q8NGC7 330 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 GNRH2O43555 120 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
KCTD3-201ENST00000259154 AGPAT4-IT1Q9H0P7 198 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 DOPEY1Q5JWR5 2465 aa11.6□□□□□ -0.55
KCTD3-201ENST00000259154 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 E7EQL1 145 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 TNFRSF18Q9Y5U5 241 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 MLST8Q9BVC4 326 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 SMIM2Q9BVW6 85 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 DPH3P1Q9H4G8 78 aa11.59□□□□□ -0.55
KCTD3-201ENST00000259154 ID1P41134 155 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 PAX8Q06710 450 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 PRSS22Q9GZN4 317 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 POLQO75417 2590 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 M0R2P5 195 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 CRIP1P50238 77 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 PSMG4Q5JS54 123 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 VMO1Q7Z5L0 202 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 CITED1Q99966 193 aa11.58□□□□□ -0.56
KCTD3-201ENST00000259154 RPL39P62891 51 aaKnown RBP11.58□□□□□ -0.56
KCTD3-201ENST00000259154 K7EIM0 57 aa11.57□□□□□ -0.56
KCTD3-201ENST00000259154 DNAL4O96015 105 aa11.57□□□□□ -0.56
KCTD3-201ENST00000259154 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
KCTD3-201ENST00000259154 A0A087WX48 190 aa11.57□□□□□ -0.56
KCTD3-201ENST00000259154 FOXI1Q12951 378 aa11.57□□□□□ -0.56
KCTD3-201ENST00000259154 TRPT1Q86TN4 253 aaKnown RBP11.57□□□□□ -0.56
KCTD3-201ENST00000259154 DUSP14O95147 198 aaKnown RBP11.57□□□□□ -0.56
KCTD3-201ENST00000259154 SIVA1O15304 175 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 CIRBPQ14011 172 aaKnown RBP11.56□□□□□ -0.56
KCTD3-201ENST00000259154 IGFL3Q6UXB1 125 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 EDA2RQ9HAV5 297 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 ATP6V0E1O15342 81 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 C11orf68Q9H3H3 251 aaKnown RBP11.56□□□□□ -0.56
KCTD3-201ENST00000259154 PRO1854Q9UHT4 67 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 KLK9Q9UKQ9 250 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 NAV2Q8IVL1 2488 aa11.56□□□□□ -0.56
KCTD3-201ENST00000259154 C19orf54Q5BKX5 351 aa11.55□□□□□ -0.56
KCTD3-201ENST00000259154 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
KCTD3-201ENST00000259154 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
KCTD3-201ENST00000259154 SPANXB1Q9NS25 103 aaPredicted RBP11.55□□□□□ -0.56
KCTD3-201ENST00000259154 OPRPNQ99935 248 aaPredicted RBP11.54□□□□□ -0.56
KCTD3-201ENST00000259154 ABCA12Q86UK0 2595 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 IGHV3-38A0A0C4DH36 116 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 GRNP28799 593 aaKnown RBP11.54□□□□□ -0.56
KCTD3-201ENST00000259154 PDE6HQ13956 83 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 LHBP01229 141 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 ANKRD29Q8N6D5 301 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 DAND5Q8N907 189 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE5Q13069 117 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE6Q13070 117 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 IGFL2Q6UWQ7 119 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 TMEM14CQ9P0S9 112 aa11.54□□□□□ -0.56
KCTD3-201ENST00000259154 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 RAI1Q7Z5J4 1906 aaPredicted RBP11.53□□□□□ -0.56
KCTD3-201ENST00000259154 TRBV7-9A0A0J9YWB2 115 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 I3L2K1 104 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 SYNJ2BPP57105 145 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 JPT2Q9H910 190 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 OVOL3O00110 214 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE7O76087 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE12FP0CL80 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE12GP0CL81 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE12IP0CL82 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 GAGE4Q13068 117 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 A4D1N5 150 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 K7ENP7 123 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 IGHV3-53P01767 116 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 ATP5J2P56134 94 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 NUP37Q8NFH4 326 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
KCTD3-201ENST00000259154 ZNF462Q96JM2 2506 aa11.52□□□□□ -0.56
KCTD3-201ENST00000259154 NPFFO15130 113 aa11.52□□□□□ -0.56
KCTD3-201ENST00000259154 IGLV2-23P01705 113 aa11.52□□□□□ -0.56
KCTD3-201ENST00000259154 GATA4P43694 442 aa11.52□□□□□ -0.56
KCTD3-201ENST00000259154 MRPL23Q16540 153 aaKnown RBP11.52□□□□□ -0.56
KCTD3-201ENST00000259154 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
KCTD3-201ENST00000259154 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.57
KCTD3-201ENST00000259154 J3QQQ9 107 aa11.52□□□□□ -0.57
KCTD3-201ENST00000259154 IFITM1P13164 125 aa11.52□□□□□ -0.57
KCTD3-201ENST00000259154 Q6ZQT7 251 aa11.52□□□□□ -0.57
KCTD3-201ENST00000259154 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
KCTD3-201ENST00000259154 ATXN8Q156A1 80 aa11.51□□□□□ -0.57
KCTD3-201ENST00000259154 MTORP42345 2549 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms