RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 XGP55808 180 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 OR10J3Q5JRS4 329 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 SAPCD1Q5SSQ6 148 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 BORCS7-ASMTA0A0B4J1R7 106 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 IGKV3D-20A0A0C4DH25 116 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 IFNA7P01567 189 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 FGF8P55075 233 aaPredicted RBP12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 Q6ZSN1 163 aa12.78□□□□□ -0.36
TM6SF1-201ENST00000258909 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 IGHV3-30P01768 117 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 IGHV3-33P01772 117 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 IGHV3-30-3P0DP02 117 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 LINC01556Q5JQF7 62 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 OR2T35Q8NGX2 323 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 Q9HAA7 133 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
TM6SF1-201ENST00000258909 CTXND1A0A1B0GTU2 59 aa12.76□□□□□ -0.37
TM6SF1-201ENST00000258909 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
TM6SF1-201ENST00000258909 PSCAO43653 123 aa12.76□□□□□ -0.37
TM6SF1-201ENST00000258909 CIDEAO60543 219 aa12.76□□□□□ -0.37
TM6SF1-201ENST00000258909 PTH2Q96A98 100 aa12.76□□□□□ -0.37
TM6SF1-201ENST00000258909 S100A4P26447 101 aaKnown RBP12.75□□□□□ -0.37
TM6SF1-201ENST00000258909 ATP6V0E2Q8NHE4 81 aa12.75□□□□□ -0.37
TM6SF1-201ENST00000258909 IBA57-AS1B1ANH7 110 aa12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 PEX7O00628 323 aa12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 MGST1P10620 155 aaKnown RBP12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 LGALSLQ3ZCW2 172 aaPredicted RBP12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 LELP1Q5T871 98 aa12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 GTSF1LQ9H1H1 148 aa12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 PARLQ9H300 379 aa12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 JPT2Q9H910 190 aa12.74□□□□□ -0.37
TM6SF1-201ENST00000258909 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 FABP5P3A8MUU1 101 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 G3V3Q6 166 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 GCSHP23434 173 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 GAGE1Q13065 139 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 GAGE4Q13068 117 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 GAGE5Q13069 117 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 AKR1C8PQ5T2L2 129 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 Q86TA4 180 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 Q8N3U1 123 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 Q9UF83 564 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 HERC1Q15751 4861 aa12.73□□□□□ -0.37
TM6SF1-201ENST00000258909 LRCOL1A6NCL2 159 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 M0R036 132 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 ASIPP42127 132 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 CRIP1P50238 77 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 ZC2HC1AQ96GY0 325 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 SAMD10Q9BYL1 202 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 B4DEV8 164 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 H3BVH4 76 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 ARPC5O15511 151 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 HAMPP81172 84 aa12.72□□□□□ -0.37
TM6SF1-201ENST00000258909 IGLV5-52A0A0A0MRZ9 124 aa12.71□□□□□ -0.38
TM6SF1-201ENST00000258909 GRIFINA4D1Z8 144 aa12.71□□□□□ -0.38
TM6SF1-201ENST00000258909 A8MWV9 139 aa12.71□□□□□ -0.38
TM6SF1-201ENST00000258909 DMRTA1Q5VZB9 504 aa12.71□□□□□ -0.38
TM6SF1-201ENST00000258909 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.38
TM6SF1-201ENST00000258909 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 SMR3BP02814 79 aaPredicted RBP12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 ZFP2Q6ZN57 461 aa12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 C14orf178Q8N769 122 aaPredicted RBP12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 HIST1H2BAQ96A08 127 aa12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 IL36BQ9NZH7 164 aa12.7□□□□□ -0.38
TM6SF1-201ENST00000258909 KRBOX1C9JBD0 128 aa12.69□□□□□ -0.38
TM6SF1-201ENST00000258909 SMLR1H3BR10 107 aa12.69□□□□□ -0.38
TM6SF1-201ENST00000258909 SH2D1AO60880 128 aa12.69□□□□□ -0.38
TM6SF1-201ENST00000258909 ARMS2P0C7Q2 107 aa12.69□□□□□ -0.38
TM6SF1-201ENST00000258909 TMSB15BA0A087X1C1 80 aa12.68□□□□□ -0.38
TM6SF1-201ENST00000258909 LINC00694P0DN24 101 aa12.68□□□□□ -0.38
TM6SF1-201ENST00000258909 Q5VSD8 79 aa12.68□□□□□ -0.38
TM6SF1-201ENST00000258909 Q8N814 137 aa12.68□□□□□ -0.38
TM6SF1-201ENST00000258909 NKX6-2Q9C056 277 aaPredicted RBP12.68□□□□□ -0.38
TM6SF1-201ENST00000258909 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
TM6SF1-201ENST00000258909 DNAH8Q96JB1 4490 aa12.67□□□□□ -0.38
TM6SF1-201ENST00000258909 SRRM2Q9UQ35 2752 aaKnown RBP12.67□□□□□ -0.38
TM6SF1-201ENST00000258909 FHITP49789 147 aa12.67□□□□□ -0.38
TM6SF1-201ENST00000258909 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
TM6SF1-201ENST00000258909 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
TM6SF1-201ENST00000258909 INAFM2P0DMQ5 153 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 UBE2G1P62253 170 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 PIK3CD-AS1Q5SR53 167 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 CST9LP1Q5W188 147 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 FRZBQ92765 325 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 ZFP30Q9Y2G7 519 aa12.66□□□□□ -0.38
TM6SF1-201ENST00000258909 RGS21Q2M5E4 152 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 FAM162BQ5T6X4 162 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 DAZ4Q86SG3 579 aaKnown RBP12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 SYT8Q8NBV8 401 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 FMC1Q96HJ9 113 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 DAZ3Q9NR90 486 aaKnown RBP12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 A0A087WWL8 130 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 WFDC2Q14508 124 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 DNLZQ5SXM8 178 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms