RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 C10orf105Q8TEF2 133 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 SCGB3A1Q96QR1 104 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 PRORYQ9H606 182 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
DDX56-201ENST00000258772 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
DDX56-201ENST00000258772 MUC4Q99102 2169 aa11.49□□□□□ -0.57
DDX56-201ENST00000258772 TRBV7-9A0A0J9YWB2 115 aa11.49□□□□□ -0.57
DDX56-201ENST00000258772 K7EMI3 77 aa11.49□□□□□ -0.57
DDX56-201ENST00000258772 SLC25A16P16260 332 aa11.49□□□□□ -0.57
DDX56-201ENST00000258772 PHLDA1Q8WV24 401 aaPredicted RBP11.49□□□□□ -0.57
DDX56-201ENST00000258772 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 SAP30O75446 220 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■□□ 17.6
DDX56-201ENST00000258772 K7ERJ3 54 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 MGPP08493 103 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 NEXN-AS1Q8NBZ9 246 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 CCL19Q99731 98 aa11.48□□□□□ -0.57
DDX56-201ENST00000258772 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
DDX56-201ENST00000258772 NHP2Q9NX24 153 aaKnown RBP11.47□□□□□ -0.57
DDX56-201ENST00000258772 TAL2Q16559 108 aa11.47□□□□□ -0.57
DDX56-201ENST00000258772 C2orf66Q6UXQ4 117 aa11.47□□□□□ -0.57
DDX56-201ENST00000258772 SRD5A1P18405 259 aa11.46□□□□□ -0.57
DDX56-201ENST00000258772 PPP1R17O96001 155 aa11.46□□□□□ -0.58
DDX56-201ENST00000258772 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.58
DDX56-201ENST00000258772 POM121L12Q8N7R1 296 aa11.46□□□□□ -0.58
DDX56-201ENST00000258772 SPG11Q96JI7 2443 aa11.46□□□□□ -0.58
DDX56-201ENST00000258772 IGHV4-30-2A0A087WSY4 118 aa11.45□□□□□ -0.58
DDX56-201ENST00000258772 KLLNB2CW77 178 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 NXPH4O95158 308 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 EDN2P20800 178 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 ATP5J2P56134 94 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 OR11H12B2RN74 326 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 MSMBP08118 114 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 LINC00315P59091 139 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 CFHR3Q02985 330 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 OR11H1Q8NG94 326 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 CSTL1Q9H114 145 aa11.44□□□□□ -0.58
DDX56-201ENST00000258772 ITPR1Q14643 2758 aa11.43□□□□□ -0.58
DDX56-201ENST00000258772 K7EMT4 169 aa11.43□□□□□ -0.58
DDX56-201ENST00000258772 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
DDX56-201ENST00000258772 CSPG4Q6UVK1 2322 aa11.43□□□□□ -0.58
DDX56-201ENST00000258772 PRSS29PA6NIE9 313 aa11.43□□□□□ -0.58
DDX56-201ENST00000258772 G3V4G9 280 aa11.43□□□□□ -0.58
DDX56-201ENST00000258772 IGHV4OR15-8A0A075B7B6 117 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 A0A087WW49 117 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 AVPP01185 164 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 ID1P41134 155 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 FAM159AQ6UWV7 190 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 TRBV7-3A0A075B6L6 115 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 IGLL5B9A064 214 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 E9PLD3 99 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
DDX56-201ENST00000258772 LINC01619G3V211 115 aa11.41□□□□□ -0.58
DDX56-201ENST00000258772 WFDC12Q8WWY7 111 aa11.41□□□□□ -0.58
DDX56-201ENST00000258772 JPT2Q9H910 190 aa11.41□□□□□ -0.58
DDX56-201ENST00000258772 RPL32P62910 135 aaKnown RBP11.4□□□□□ -0.58
DDX56-201ENST00000258772 DUSP14O95147 198 aaKnown RBP11.4□□□□□ -0.59
DDX56-201ENST00000258772 POLR2KP53803 58 aaKnown RBP11.4□□□□□ -0.59
DDX56-201ENST00000258772 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.59
DDX56-201ENST00000258772 FOXI2Q6ZQN5 318 aa11.39□□□□□ -0.59
DDX56-201ENST00000258772 ZNF479Q96JC4 524 aa11.39□□□□□ -0.59
DDX56-201ENST00000258772 CYSLTR1Q9Y271 337 aa11.39□□□□□ -0.59
DDX56-201ENST00000258772 TRAV12-3A0A0B4J271 114 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 B4DSR2 109 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 CRYGDP07320 174 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 LGALS1P09382 135 aaKnown RBP11.38□□□□□ -0.59
DDX56-201ENST00000258772 CD7P09564 240 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 PSMB8P28062 276 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 PRADC1Q9BSG0 188 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 ZNF580Q9UK33 172 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 TSHBP01222 138 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 SUMO4Q6EEV6 95 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 COL12A1Q99715 3063 aa11.38□□□□□ -0.59
DDX56-201ENST00000258772 MAP1AP78559 2803 aaPredicted RBP11.38□□□□□ -0.59
DDX56-201ENST00000258772 A0A087WWL8 130 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 ZFP2Q6ZN57 461 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 CLUHP3Q96NS8 147 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 VCYO14598 125 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
DDX56-201ENST00000258772 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 F5H697 171 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 RIPPLY3P57055 190 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 ZNF688P0C7X2 276 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 C10orf99Q6UWK7 81 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
DDX56-201ENST00000258772 ZNF815PA8K554 130 aa11.35□□□□□ -0.59
DDX56-201ENST00000258772 COX6B1P14854 86 aa11.35□□□□□ -0.59
DDX56-201ENST00000258772 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
DDX56-201ENST00000258772 SCGB2A2Q13296 93 aa11.35□□□□□ -0.59
DDX56-201ENST00000258772 SORL1Q92673 2214 aa11.35□□□□□ -0.59
DDX56-201ENST00000258772 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms