RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 C16orf54Q6UWD8 224 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 FHL1Q13642 323 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 A0A1W2PNU3 283 aaPredicted RBP11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 CRYGDP07320 174 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 KIR2DL5BQ8NHK3 375 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 VSIG2Q96IQ7 327 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
ZC3H4-201ENST00000253048 IGLC7A0M8Q6 106 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 M0R2N4 97 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 BVES-AS1Q5T3Y7 98 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 YLPM1P49750 1951 aaKnown RBP11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 A8MWP6 167 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 NREPQ16612 68 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 PRO0255Q9UI72 69 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 MPDZO75970 2070 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 IFITM1P13164 125 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 CRYBA4P53673 196 aa11.11□□□□□ -0.63
ZC3H4-201ENST00000253048 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 FGF6P10767 208 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 HERV-K104P63124 156 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 POU2AF1Q16633 256 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 NFE4Q86UQ8 179 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
ZC3H4-201ENST00000253048 SEM1Q6ZVN7 128 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 C11orf53Q8IXP5 236 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 PLXNA4Q9HCM2 1894 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 IGLV11-55A0A075B6I3 123 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 LTAP01374 205 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 ODF3L1Q8IXM7 274 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 Q8N7P7 452 aa11.09□□□□□ -0.63
ZC3H4-201ENST00000253048 EP400Q96L91 3159 aa11.08□□□□□ -0.64
ZC3H4-201ENST00000253048 PHF3Q92576 2039 aaKnown RBP11.08□□□□□ -0.64
ZC3H4-201ENST00000253048 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
ZC3H4-201ENST00000253048 C20orf144Q9BQM9 153 aa11.08□□□□□ -0.64
ZC3H4-201ENST00000253048 Q9H8V8 135 aa11.08□□□□□ -0.64
ZC3H4-201ENST00000253048 MAP6D1Q9H9H5 199 aa11.08□□□□□ -0.64
ZC3H4-201ENST00000253048 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 ACYP1P07311 99 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 C9JQL5 133 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 FXYD5Q96DB9 178 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 USF3Q68DE3 2245 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 TMEM61Q8N0U2 210 aa11.07□□□□□ -0.64
ZC3H4-201ENST00000253048 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 H3BQ85 93 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 A0A087WZ39 114 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 NCR3O14931 201 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 RITA1Q96K30 269 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 CYTL1Q9NRR1 136 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 SMIM9A6NGZ8 99 aa11.06□□□□□ -0.64
ZC3H4-201ENST00000253048 FER1L5A0AVI2 2057 aa11.05□□□□□ -0.64
ZC3H4-201ENST00000253048 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
ZC3H4-201ENST00000253048 ROS1P08922 2347 aa11.05□□□□□ -0.64
ZC3H4-201ENST00000253048 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
ZC3H4-201ENST00000253048 GPR179Q6PRD1 2367 aa11.05□□□□□ -0.64
ZC3H4-201ENST00000253048 ARFGEF3Q5TH69 2177 aa11.04□□□□□ -0.64
ZC3H4-201ENST00000253048 CXCL5P42830 114 aa11.04□□□□□ -0.64
ZC3H4-201ENST00000253048 HEATR5AQ86XA9 2040 aa11.04□□□□□ -0.64
ZC3H4-201ENST00000253048 I3L2K1 104 aa11.04□□□□□ -0.64
ZC3H4-201ENST00000253048 CTSGP08311 255 aa11.04□□□□□ -0.64
ZC3H4-201ENST00000253048 SPRY4Q9C004 299 aa11.04□□□□□ -0.64
ZC3H4-201ENST00000253048 Q8N1Y9 231 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PLXND1Q9Y4D7 1925 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 J3QQQ9 107 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PRR20EP86478 221 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PRR20CP86479 221 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PRR20DP86480 221 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PRR20BP86481 221 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PRR20AP86496 221 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 Q6ZSV7 163 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 PRO3102Q9H379 93 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 DOCK9Q9BZ29 2069 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
ZC3H4-201ENST00000253048 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BKO60814 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BJP06899 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BOP23527 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BBP33778 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BDP58876 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BCP62807 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 LINC00482Q8N8I6 264 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms