RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 LURAP1LQ8IV03 231 aa17.08■□□□□ 0.33
HOXD9-201ENST00000249499 OR2K2Q8NGT1 345 aa17.08■□□□□ 0.33
HOXD9-201ENST00000249499 LINC01545Q5VT33 79 aa17.07■□□□□ 0.32
HOXD9-201ENST00000249499 ATOH7Q8N100 152 aa17.07■□□□□ 0.32
HOXD9-201ENST00000249499 YAE1D1Q9NRH1 226 aa17.07■□□□□ 0.32
HOXD9-201ENST00000249499 IGLC3P0DOY3 106 aa17.07■□□□□ 0.32
HOXD9-201ENST00000249499 RNASE3P12724 160 aaKnown RBP17.07■□□□□ 0.32
HOXD9-201ENST00000249499 DEFB136Q30KP8 78 aa17.07■□□□□ 0.32
HOXD9-201ENST00000249499 Q8N8P6 123 aa17.06■□□□□ 0.32
HOXD9-201ENST00000249499 DPH3P1Q9H4G8 78 aa17.06■□□□□ 0.32
HOXD9-201ENST00000249499 ESM1Q9NQ30 184 aa17.06■□□□□ 0.32
HOXD9-201ENST00000249499 TMEM160Q9NX00 188 aa17.06■□□□□ 0.32
HOXD9-201ENST00000249499 NRACQ8N912 160 aa17.05■□□□□ 0.32
HOXD9-201ENST00000249499 KLHL30-AS1Q8NEE0 82 aa17.05■□□□□ 0.32
HOXD9-201ENST00000249499 RNASE1P07998 156 aaKnown RBP17.05■□□□□ 0.32
HOXD9-201ENST00000249499 CDKN1BP46527 198 aa17.05■□□□□ 0.32
HOXD9-201ENST00000249499 GNRH2O43555 120 aa17.04■□□□□ 0.32
HOXD9-201ENST00000249499 KHDC1LQ5JSQ8 128 aa17.04■□□□□ 0.32
HOXD9-201ENST00000249499 AP1S3Q96PC3 154 aa17.04■□□□□ 0.32
HOXD9-201ENST00000249499 C16orf95Q9H693 158 aa17.04■□□□□ 0.32
HOXD9-201ENST00000249499 TIMM8BQ9Y5J9 83 aaPredicted RBP17.04■□□□□ 0.32
HOXD9-201ENST00000249499 M0R381 172 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 GAS8-AS1O95177 125 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 SNHG12Q9BXW3 62 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 ST20Q9HBF5 79 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 IGLV2-18A0A075B6J9 118 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 A8MTW9 85 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 EREGO14944 169 aa17.03■□□□□ 0.32
HOXD9-201ENST00000249499 FCER1GP30273 86 aa17.02■□□□□ 0.32
HOXD9-201ENST00000249499 POM121L12Q8N7R1 296 aa17.02■□□□□ 0.32
HOXD9-201ENST00000249499 TRAV12-3A0A0B4J271 114 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 HSBP1L1C9JCN9 74 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 IGLL1P15814 213 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 DLX4Q92988 240 aaPredicted RBP17.01■□□□□ 0.31
HOXD9-201ENST00000249499 PPP1R17O96001 155 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 GATA1P15976 413 aaPredicted RBP17.01■□□□□ 0.31
HOXD9-201ENST00000249499 LGALS9BQ3B8N2 356 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 MAJINQ3KP22 176 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 LGALS9CQ6DKI2 356 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 AMTNQ6UX39 209 aa17.01■□□□□ 0.31
HOXD9-201ENST00000249499 C20orf78Q9BR46 151 aa17■□□□□ 0.31
HOXD9-201ENST00000249499 SONP18583 2426 aaKnown RBP16.99■□□□□ 0.31
HOXD9-201ENST00000249499 FHL3Q13643 280 aa16.99■□□□□ 0.31
HOXD9-201ENST00000249499 CD7P09564 240 aa16.99■□□□□ 0.31
HOXD9-201ENST00000249499 HNRNPA3P51991 378 aaKnown RBP16.99■□□□□ 0.31
HOXD9-201ENST00000249499 Q6ZN92 141 aa16.99■□□□□ 0.31
HOXD9-201ENST00000249499 DYNLRB2Q8TF09 96 aa16.99■□□□□ 0.31
HOXD9-201ENST00000249499 IFI27L1Q96BM0 104 aa16.99■□□□□ 0.31
HOXD9-201ENST00000249499 K7EMI3 77 aa16.98■□□□□ 0.31
HOXD9-201ENST00000249499 HLA-DRB4P13762 266 aa16.98■□□□□ 0.31
HOXD9-201ENST00000249499 C9orf85Q96MD7 179 aa16.98■□□□□ 0.31
HOXD9-201ENST00000249499 HLA-DRB4X5D2U9 266 aa16.98■□□□□ 0.31
HOXD9-201ENST00000249499 TRAV26-2A0A0B4J265 109 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 TRAV25A0A0B4J276 109 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 TMEM61Q8N0U2 210 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 C14orf178Q8N769 122 aaPredicted RBP16.97■□□□□ 0.31
HOXD9-201ENST00000249499 ZNF418Q8TF45 676 aaPredicted RBP16.97■□□□□ 0.31
HOXD9-201ENST00000249499 IGHV1OR15-1A0A075B7D0 117 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 IGHV3-16A0A0C4DH30 117 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 H0Y8G0 127 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 DEFB114Q30KQ6 69 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 MTORP42345 2549 aa16.97■□□□□ 0.31
HOXD9-201ENST00000249499 LAGE3Q14657 143 aa16.96■□□□□ 0.31
HOXD9-201ENST00000249499 SPINK13Q1W4C9 94 aa16.96■□□□□ 0.31
HOXD9-201ENST00000249499 DUX3Q96PT4 197 aa16.96■□□□□ 0.31
HOXD9-201ENST00000249499 SPAG8Q99932 426 aaPredicted RBP16.96■□□□□ 0.31
HOXD9-201ENST00000249499 A0A1B0GV90 55 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 IGKV3-20P01619 116 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 DEFB131AP59861 70 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 RAX2Q96IS3 184 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 SMIM2Q9BVW6 85 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 KIF25-AS1Q9Y6Z4 181 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 SMIM17P0DL12 118 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 HILS1P60008 231 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 RASL10AQ92737 203 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 SMR3AQ99954 134 aa16.95■□□□□ 0.3
HOXD9-201ENST00000249499 TSSC4Q9Y5U2 329 aaPredicted RBP16.95■□□□□ 0.3
HOXD9-201ENST00000249499 TRAV12-2A0A075B6T6 113 aa16.94■□□□□ 0.3
HOXD9-201ENST00000249499 SUMO2P61956 95 aaKnown RBP16.94■□□□□ 0.3
HOXD9-201ENST00000249499 SYT8Q8NBV8 401 aa16.94■□□□□ 0.3
HOXD9-201ENST00000249499 LINC01006Q8NI28 216 aa16.94■□□□□ 0.3
HOXD9-201ENST00000249499 MRPS16Q9Y3D3 137 aaKnown RBP16.94■□□□□ 0.3
HOXD9-201ENST00000249499 TRGV11A0A075B6L2 103 aa16.93■□□□□ 0.3
HOXD9-201ENST00000249499 H3BMM0 161 aa16.93■□□□□ 0.3
HOXD9-201ENST00000249499 GOLT1BQ9Y3E0 138 aa16.93■□□□□ 0.3
HOXD9-201ENST00000249499 CCL24O00175 119 aa16.93■□□□□ 0.3
HOXD9-201ENST00000249499 FXYD7P58549 80 aa16.93■□□□□ 0.3
HOXD9-201ENST00000249499 RPL32P62910 135 aaKnown RBP16.93■□□□□ 0.3
HOXD9-201ENST00000249499 hDV102S1A0JD36 115 aa16.92■□□□□ 0.3
HOXD9-201ENST00000249499 ATP5LO75964 103 aa16.92■□□□□ 0.3
HOXD9-201ENST00000249499 CD28P10747 220 aa16.92■□□□□ 0.3
HOXD9-201ENST00000249499 LINC00315P59091 139 aa16.92■□□□□ 0.3
HOXD9-201ENST00000249499 Q8N1Y9 231 aa16.92■□□□□ 0.3
HOXD9-201ENST00000249499 TMEM158Q8WZ71 300 aa16.92■□□□□ 0.3
HOXD9-201ENST00000249499 SPRY2O43597 315 aa16.91■□□□□ 0.3
HOXD9-201ENST00000249499 NDUFA7O95182 113 aa16.91■□□□□ 0.3
HOXD9-201ENST00000249499 MGPP08493 103 aa16.91■□□□□ 0.3
HOXD9-201ENST00000249499 ORMDL2Q53FV1 153 aa16.91■□□□□ 0.3
HOXD9-201ENST00000249499 CLUHP3Q96NS8 147 aa16.91■□□□□ 0.3
HOXD9-201ENST00000249499 MAP6D1Q9H9H5 199 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms