RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MGPP08493 103 aa14.63□□□□□ -0.07
CDC42EP1-201ENST00000249014 TTTY13Q9BZ97 58 aa14.63□□□□□ -0.07
CDC42EP1-201ENST00000249014 DPM2O94777 84 aa14.62□□□□□ -0.07
CDC42EP1-201ENST00000249014 COX6B1P14854 86 aa14.62□□□□□ -0.07
CDC42EP1-201ENST00000249014 MRPL35Q9NZE8 188 aaKnown RBP14.62□□□□□ -0.07
CDC42EP1-201ENST00000249014 CR1P17927 2039 aa14.62□□□□□ -0.07
CDC42EP1-201ENST00000249014 MXRA5Q9NR99 2828 aa14.62□□□□□ -0.07
CDC42EP1-201ENST00000249014 SEC11AP67812 179 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 GTSCR1Q86UQ5 136 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 TMEM89A2RUT3 159 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 NXPH4O95158 308 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 ZNF688P0C7X2 276 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 C20orf78Q9BR46 151 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 TMEM160Q9NX00 188 aa14.61□□□□□ -0.07
CDC42EP1-201ENST00000249014 HSD52Q0P140 79 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 ZC2HC1BQ5TFG8 222 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 AP1S3Q96PC3 154 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 VPREB3Q9UKI3 123 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 LRRK2Q5S007 2527 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 UBR5O95071 2799 aaPredicted RBP14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 TRAV12-3A0A0B4J271 114 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 PSMG4Q5JS54 123 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 FAM159AQ6UWV7 190 aa14.6□□□□□ -0.07
CDC42EP1-201ENST00000249014 FSHBP01225 129 aa14.59□□□□□ -0.07
CDC42EP1-201ENST00000249014 KRTAP10-9P60411 292 aa14.59□□□□□ -0.07
CDC42EP1-201ENST00000249014 SAMD13Q5VXD3 122 aa14.59□□□□□ -0.07
CDC42EP1-201ENST00000249014 KIF25-AS1Q9Y6Z4 181 aa14.59□□□□□ -0.07
CDC42EP1-201ENST00000249014 A0A087WX48 190 aa14.58□□□□□ -0.07
CDC42EP1-201ENST00000249014 TRAV8-6A0A0B4J262 113 aa14.58□□□□□ -0.07
CDC42EP1-201ENST00000249014 SYNJ2BPP57105 145 aa14.58□□□□□ -0.07
CDC42EP1-201ENST00000249014 LINC00315P59091 139 aa14.58□□□□□ -0.07
CDC42EP1-201ENST00000249014 AMMECR1LQ6DCA0 310 aa14.58□□□□□ -0.07
CDC42EP1-201ENST00000249014 Q6YL49 198 aa14.58□□□□□ -0.07
CDC42EP1-201ENST00000249014 AGRNO00468 2067 aa14.58□□□□□ -0.08
CDC42EP1-201ENST00000249014 IGHV4-31P0DP07 118 aa14.58□□□□□ -0.08
CDC42EP1-201ENST00000249014 ORMDL2Q53FV1 153 aa14.58□□□□□ -0.08
CDC42EP1-201ENST00000249014 POM121L12Q8N7R1 296 aa14.58□□□□□ -0.08
CDC42EP1-201ENST00000249014 JPT2Q9H910 190 aa14.58□□□□□ -0.08
CDC42EP1-201ENST00000249014 ZNF702PQ9H963 129 aa14.58□□□□□ -0.08
CDC42EP1-201ENST00000249014 IGHV4OR15-8A0A075B7B6 117 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 A0A087WW49 117 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 TOMM6Q96B49 74 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 K7EQG2 157 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 IGKV3-20P01619 116 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 LGALS1P09382 135 aaKnown RBP14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 CD7P09564 240 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 OR4C5Q8NGB2 326 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 DUX5Q96PT3 197 aa14.57□□□□□ -0.08
CDC42EP1-201ENST00000249014 A0A0J9YX75 114 aa14.56□□□□□ -0.08
CDC42EP1-201ENST00000249014 BEX4Q9NWD9 120 aaPredicted RBP14.56□□□□□ -0.08
CDC42EP1-201ENST00000249014 TRAV12-2A0A075B6T6 113 aa14.56□□□□□ -0.08
CDC42EP1-201ENST00000249014 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
CDC42EP1-201ENST00000249014 PTPN13Q12923 2485 aa14.55□□□□□ -0.08
CDC42EP1-201ENST00000249014 SCGB3A1Q96QR1 104 aa14.55□□□□□ -0.08
CDC42EP1-201ENST00000249014 SNRPD3P62318 126 aaKnown RBP14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 NEGR1Q7Z3B1 354 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 CSTL1Q9H114 145 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 TRAV12-1A0A0B4J245 112 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 A6NDN8 102 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 K7EMI3 77 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 ELANEP08246 267 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 HOXD3P31249 432 aaPredicted RBP14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 ZNF843Q8N446 348 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 ODF3Q96PU9 254 aa14.54□□□□□ -0.08
CDC42EP1-201ENST00000249014 LGALS9O00182 355 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 C2orf66Q6UXQ4 117 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 TRBV25-1A0A075B6N4 114 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 A0A087WWL8 130 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 H3BRM9 83 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 PLNP26678 52 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 NEXN-AS1Q8NBZ9 246 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 UBE2E2Q96LR5 201 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 HIGD1BQ9P298 99 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 TEX15Q9BXT5 2789 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 SORL1Q92673 2214 aa14.53□□□□□ -0.08
CDC42EP1-201ENST00000249014 F8VRH5 84 aa14.52□□□□□ -0.08
CDC42EP1-201ENST00000249014 H7C1H1 209 aa14.52□□□□□ -0.08
CDC42EP1-201ENST00000249014 PPP1R17O96001 155 aa14.52□□□□□ -0.08
CDC42EP1-201ENST00000249014 MAPKAPK5-AS1Q8N8E1 139 aa14.52□□□□□ -0.08
CDC42EP1-201ENST00000249014 MDFICQ9P1T7 246 aa14.52□□□□□ -0.08
CDC42EP1-201ENST00000249014 ABCA12Q86UK0 2595 aa14.52□□□□□ -0.09
CDC42EP1-201ENST00000249014 IGHV3-16A0A0C4DH30 117 aa14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 SUMO4Q6EEV6 95 aa14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 CHAC1Q9BUX1 264 aa14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 K7EP13 123 aa14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 SPINK13Q1W4C9 94 aa14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 RNASE8Q8TDE3 154 aaKnown RBP14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 C9orf85Q96MD7 179 aa14.51□□□□□ -0.09
CDC42EP1-201ENST00000249014 C9orf118A6NHY6 69 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 HLA-DRB4P13762 266 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 C18orf65Q6ZTR6 163 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 DEFB104AQ8WTQ1 72 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 BAALCQ8WXS3 180 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 JMJD8Q96S16 334 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 CHTOPQ9Y3Y2 248 aaKnown RBP14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 HLA-DRB4X5D2U9 266 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 PRRC2AP48634 2157 aaKnown RBP14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 CDKN1BP46527 198 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 Q8N1Y9 231 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms