RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.95□□□□□ -0.5
LRFN1-201ENST00000248668 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 SPANXN1Q5VSR9 72 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 U3KQK5 164 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 K7EMI3 77 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 CRXO43186 299 aaPredicted RBP11.95□□□□□ -0.5
LRFN1-201ENST00000248668 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 OR10J6PQ8NGY7 276 aa11.95□□□□□ -0.5
LRFN1-201ENST00000248668 K7EP34 96 aa11.94□□□□□ -0.5
LRFN1-201ENST00000248668 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
LRFN1-201ENST00000248668 SLC25A16P16260 332 aa11.94□□□□□ -0.5
LRFN1-201ENST00000248668 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
LRFN1-201ENST00000248668 BEX4Q9NWD9 120 aaPredicted RBP11.94□□□□□ -0.5
LRFN1-201ENST00000248668 AGRNO00468 2067 aa11.94□□□□□ -0.5
LRFN1-201ENST00000248668 NEGR1Q7Z3B1 354 aa11.94□□□□□ -0.5
LRFN1-201ENST00000248668 C9orf118A6NHY6 69 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 M0R381 172 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 GATA3P23771 443 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 DAZ1Q9NQZ3 744 aaKnown RBP11.93□□□□□ -0.5
LRFN1-201ENST00000248668 IGHV7-4-1A0A0J9YVY3 117 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 NF1P21359 2839 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 DSCR9P59020 149 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 SH2D6Q7Z4S9 175 aa11.93□□□□□ -0.5
LRFN1-201ENST00000248668 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 ADAMTSL5Q6ZMM2 481 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
LRFN1-201ENST00000248668 A0A096LNT2 108 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 SOCS3O14543 225 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 CACNG7P62955 275 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 FABP2P12104 132 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 ZFAND2AQ8N6M9 145 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
LRFN1-201ENST00000248668 C2CD3Q4AC94 2353 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 A6NDN8 102 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 H3BUA1 57 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 S100A4P26447 101 aaKnown RBP11.91□□□□□ -0.5
LRFN1-201ENST00000248668 CFHR3Q02985 330 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 COX8AP10176 69 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 ETDBQ3ZM63 59 aa11.91□□□□□ -0.5
LRFN1-201ENST00000248668 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
LRFN1-201ENST00000248668 HBDP02042 147 aa11.9□□□□□ -0.5
LRFN1-201ENST00000248668 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
LRFN1-201ENST00000248668 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
LRFN1-201ENST00000248668 SMPXQ9UHP9 88 aa11.9□□□□□ -0.5
LRFN1-201ENST00000248668 GNRH2O43555 120 aa11.9□□□□□ -0.51
LRFN1-201ENST00000248668 SEC11AP67812 179 aa11.9□□□□□ -0.51
LRFN1-201ENST00000248668 SRSF2Q01130 221 aaKnown RBP11.9□□□□□ -0.51
LRFN1-201ENST00000248668 FLNAP21333 2647 aaKnown RBP11.9□□□□□ -0.51
LRFN1-201ENST00000248668 ZNF688P0C7X2 276 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 GCSHP23434 173 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 PSMB8P28062 276 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 LEPP41159 167 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 HIST2H2BCQ6DN03 193 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 NMUP48645 174 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 HERV-K104P63124 156 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 DEFB104AQ8WTQ1 72 aa11.89□□□□□ -0.51
LRFN1-201ENST00000248668 HOXA3O43365 443 aaPredicted RBP11.88□□□□□ -0.51
LRFN1-201ENST00000248668 SYNJ2BPP57105 145 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 H3BRM9 83 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 CD300EQ496F6 205 aaPredicted RBP11.88□□□□□ -0.51
LRFN1-201ENST00000248668 FN1P02751 2386 aaKnown RBP11.88□□□□□ -0.51
LRFN1-201ENST00000248668 OVOL1O14753 267 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 IGHV4-31P0DP07 118 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 WFDC2Q14508 124 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
LRFN1-201ENST00000248668 J3QR89 54 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 K7ERJ3 54 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 A0A1W2PPM0 123 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 DEFB136Q30KP8 78 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
LRFN1-201ENST00000248668 Q96MF0 132 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 DKK2Q9UBU2 259 aa11.87□□□□□ -0.51
LRFN1-201ENST00000248668 CR1P17927 2039 aa11.86□□□□□ -0.51
LRFN1-201ENST00000248668 PSMG4Q5JS54 123 aa11.86□□□□□ -0.51
LRFN1-201ENST00000248668 SAMD5Q5TGI4 173 aa11.86□□□□□ -0.51
LRFN1-201ENST00000248668 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
LRFN1-201ENST00000248668 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
LRFN1-201ENST00000248668 B5MCH6 92 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 MGPP08493 103 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 C18orf65Q6ZTR6 163 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 VPREB3Q9UKI3 123 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
LRFN1-201ENST00000248668 TRAV12-2A0A075B6T6 113 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 INSL3P51460 131 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
LRFN1-201ENST00000248668 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
LRFN1-201ENST00000248668 A0A087WW49 117 aa11.84□□□□□ -0.51
LRFN1-201ENST00000248668 FGF6P10767 208 aa11.84□□□□□ -0.51
LRFN1-201ENST00000248668 ASIPP42127 132 aa11.84□□□□□ -0.51
LRFN1-201ENST00000248668 PCP2Q8IVA1 136 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms