RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 PMCHL2Q9BQD1 86 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
CDKN1A-201ENST00000244741 FHL3Q13643 280 aa12.75□□□□□ -0.37
CDKN1A-201ENST00000244741 HINT1P49773 126 aaPredicted RBP12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 SPATA3Q8NHX4 192 aa12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 PKD1L1Q8TDX9 2849 aa12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 CKS2P33552 79 aa12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 LINC01559Q495D7 138 aa12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 LINC01545Q5VT33 79 aa12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 ANK2Q01484 3957 aa12.74□□□□□ -0.37
CDKN1A-201ENST00000244741 NCR2O95944 276 aa12.73□□□□□ -0.37
CDKN1A-201ENST00000244741 NPYP01303 97 aa12.73□□□□□ -0.37
CDKN1A-201ENST00000244741 PF4P02776 101 aa12.73□□□□□ -0.37
CDKN1A-201ENST00000244741 C11orf21Q9P2W6 132 aa12.73□□□□□ -0.37
CDKN1A-201ENST00000244741 CNFNQ9BYD5 112 aa12.73□□□□□ -0.37
CDKN1A-201ENST00000244741 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 DLEU1O43261 78 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 FXYD7P58549 80 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 OR9G4Q8NGQ1 327 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 UFC1Q9Y3C8 167 aa12.72□□□□□ -0.37
CDKN1A-201ENST00000244741 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
CDKN1A-201ENST00000244741 RHPN1-AS1Q9BWJ2 59 aa12.71□□□□□ -0.37
CDKN1A-201ENST00000244741 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
CDKN1A-201ENST00000244741 HSBP1L1C9JCN9 74 aa12.71□□□□□ -0.37
CDKN1A-201ENST00000244741 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
CDKN1A-201ENST00000244741 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
CDKN1A-201ENST00000244741 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 HIST1H1AQ02539 215 aaPredicted RBP12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 GLMPQ8WWB7 406 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 LGALS9O00182 355 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 OVOL1O14753 267 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 Q6ZQT7 251 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 OR8A1Q8NGG7 326 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 SCRT2Q9NQ03 307 aa12.7□□□□□ -0.38
CDKN1A-201ENST00000244741 NPSP0C0P6 89 aa12.69□□□□□ -0.38
CDKN1A-201ENST00000244741 RPL11P62913 178 aaKnown RBP12.69□□□□□ -0.38
CDKN1A-201ENST00000244741 GAGE1Q13065 139 aa12.69□□□□□ -0.38
CDKN1A-201ENST00000244741 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
CDKN1A-201ENST00000244741 SMPXQ9UHP9 88 aa12.69□□□□□ -0.38
CDKN1A-201ENST00000244741 SLC25A34Q6PIV7 304 aa12.69□□□□□ -0.38
CDKN1A-201ENST00000244741 CMYA5Q8N3K9 4069 aa12.68□□□□□ -0.38
CDKN1A-201ENST00000244741 K7EMT4 169 aa12.68□□□□□ -0.38
CDKN1A-201ENST00000244741 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
CDKN1A-201ENST00000244741 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
CDKN1A-201ENST00000244741 SORL1Q92673 2214 aa12.68□□□□□ -0.38
CDKN1A-201ENST00000244741 SHISA2Q6UWI4 295 aa12.67□□□□□ -0.38
CDKN1A-201ENST00000244741 LINC00482Q8N8I6 264 aa12.67□□□□□ -0.38
CDKN1A-201ENST00000244741 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
CDKN1A-201ENST00000244741 HBDP02042 147 aa12.67□□□□□ -0.38
CDKN1A-201ENST00000244741 ZNF124Q15973 351 aa12.67□□□□□ -0.38
CDKN1A-201ENST00000244741 Q6ZVH6 145 aa12.66□□□□□ -0.38
CDKN1A-201ENST00000244741 SAP30O75446 220 aa12.66□□□□□ -0.38
CDKN1A-201ENST00000244741 PPBPP02775 128 aa12.66□□□□□ -0.38
CDKN1A-201ENST00000244741 GATA1P15976 413 aaPredicted RBP12.66□□□□□ -0.38
CDKN1A-201ENST00000244741 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
CDKN1A-201ENST00000244741 MPV17L2Q567V2 206 aa12.65□□□□□ -0.38
CDKN1A-201ENST00000244741 PRR9Q5T870 116 aa12.65□□□□□ -0.38
CDKN1A-201ENST00000244741 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
CDKN1A-201ENST00000244741 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
CDKN1A-201ENST00000244741 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
CDKN1A-201ENST00000244741 EVI2AP22794 236 aa12.64□□□□□ -0.39
CDKN1A-201ENST00000244741 WFDC3Q8IUB2 231 aa12.64□□□□□ -0.39
CDKN1A-201ENST00000244741 DYNLRB2Q8TF09 96 aa12.64□□□□□ -0.39
CDKN1A-201ENST00000244741 SOCS3O14543 225 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 DEFB1P60022 68 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 CACNG7P62955 275 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 LGALS9CQ6DKI2 356 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 NUDT3O95989 172 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
CDKN1A-201ENST00000244741 LINC01546A6NGU7 62 aa12.62□□□□□ -0.39
CDKN1A-201ENST00000244741 J3KRW8 73 aa12.62□□□□□ -0.39
CDKN1A-201ENST00000244741 COX8AP10176 69 aa12.62□□□□□ -0.39
CDKN1A-201ENST00000244741 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
CDKN1A-201ENST00000244741 ANKRD39Q53RE8 183 aa12.62□□□□□ -0.39
CDKN1A-201ENST00000244741 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
CDKN1A-201ENST00000244741 TMEM61Q8N0U2 210 aa12.61□□□□□ -0.39
CDKN1A-201ENST00000244741 ORAOV1Q8WV07 137 aa12.61□□□□□ -0.39
CDKN1A-201ENST00000244741 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
CDKN1A-201ENST00000244741 SNAI2O43623 268 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 LEPP41159 167 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 RIPPLY3P57055 190 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 BVES-AS1Q5T3Y7 98 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 ZFAND2AQ8N6M9 145 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 COX11Q9Y6N1 276 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
CDKN1A-201ENST00000244741 IGHV4-4A0A075B6R2 117 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 H3BVH4 76 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 FCER1GP30273 86 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 SPANXN1Q5VSR9 72 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 C2orf91Q6ZV80 131 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 OR2K2Q8NGT1 345 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 OR10J6PQ8NGY7 276 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms