RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 C21orf62-AS1Q17RA5 79 aa16.5■□□□□ 0.23
RNF39-201ENST00000244360 ZC2HC1BQ5TFG8 222 aa16.5■□□□□ 0.23
RNF39-201ENST00000244360 CHAC1Q9BUX1 264 aa16.5■□□□□ 0.23
RNF39-201ENST00000244360 F6UB75 175 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 SMIM13P0DJ93 91 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 MED14OSP0DP75 135 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 EDN2P20800 178 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 MAPK1IP1LQ8NDC0 245 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 VPREB3Q9UKI3 123 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 USP9YO00507 2555 aaPredicted RBP16.49■□□□□ 0.23
RNF39-201ENST00000244360 A0A087WX48 190 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 IGHV4-31P0DP07 118 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 C10orf99Q6UWK7 81 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 DCANP1Q8TF63 244 aa16.49■□□□□ 0.23
RNF39-201ENST00000244360 LRRK2Q5S007 2527 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 A0A1W2PPM0 123 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 RNF223E7ERA6 249 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 J3KRW8 73 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 K7EMI3 77 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 PLNP26678 52 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 SMIM2Q9BVW6 85 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 FAM208BQ5VWN6 2430 aa16.48■□□□□ 0.23
RNF39-201ENST00000244360 IGKV3-7A0A075B6H7 116 aa16.47■□□□□ 0.23
RNF39-201ENST00000244360 TRAV26-2A0A0B4J265 109 aa16.47■□□□□ 0.23
RNF39-201ENST00000244360 VPS25Q9BRG1 176 aa16.47■□□□□ 0.23
RNF39-201ENST00000244360 ORMDL2Q53FV1 153 aa16.47■□□□□ 0.23
RNF39-201ENST00000244360 GTSCR1Q86UQ5 136 aa16.47■□□□□ 0.23
RNF39-201ENST00000244360 TRAV12-1A0A0B4J245 112 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 GCSHP23434 173 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 ID1P41134 155 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 ASIPP42127 132 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 Q6YL49 198 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 TMEM160Q9NX00 188 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 MRPL35Q9NZE8 188 aaKnown RBP16.46■□□□□ 0.23
RNF39-201ENST00000244360 TRBV25-1A0A075B6N4 114 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 ANXA2RQ3ZCQ2 193 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 RAB37Q96AX2 223 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 C20orf78Q9BR46 151 aa16.46■□□□□ 0.23
RNF39-201ENST00000244360 BEX4Q9NWD9 120 aaPredicted RBP16.46■□□□□ 0.23
RNF39-201ENST00000244360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.45■□□□□ 0.22
RNF39-201ENST00000244360 FABP2P12104 132 aa16.45■□□□□ 0.22
RNF39-201ENST00000244360 RNASE4P34096 147 aaKnown RBP16.45■□□□□ 0.22
RNF39-201ENST00000244360 TAL2Q16559 108 aa16.45■□□□□ 0.22
RNF39-201ENST00000244360 KLLNB2CW77 178 aa16.45■□□□□ 0.22
RNF39-201ENST00000244360 KRTAP10-9P60411 292 aa16.45■□□□□ 0.22
RNF39-201ENST00000244360 DPH3P1Q9H4G8 78 aa16.45■□□□□ 0.22
RNF39-201ENST00000244360 SPCS1Q9Y6A9 102 aa16.45■□□□□ 0.22
RNF39-201ENST00000244360 SRD5A1P18405 259 aa16.44■□□□□ 0.22
RNF39-201ENST00000244360 TM2D2Q9BX73 214 aa16.44■□□□□ 0.22
RNF39-201ENST00000244360 LRRC75A-AS1Q8N1F1 130 aa16.43■□□□□ 0.22
RNF39-201ENST00000244360 ZNF702PQ9H963 129 aa16.43■□□□□ 0.22
RNF39-201ENST00000244360 POLQO75417 2590 aa16.43■□□□□ 0.22
RNF39-201ENST00000244360 M0R381 172 aa16.43■□□□□ 0.22
RNF39-201ENST00000244360 SELENOKQ9Y6D0 94 aa16.43■□□□□ 0.22
RNF39-201ENST00000244360 CSMD2Q7Z408 3487 aa16.43■□□□□ 0.22
RNF39-201ENST00000244360 ELANEP08246 267 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 S100A4P26447 101 aaKnown RBP16.42■□□□□ 0.22
RNF39-201ENST00000244360 FXYD2P54710 66 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 SUMO2P61956 95 aaKnown RBP16.42■□□□□ 0.22
RNF39-201ENST00000244360 DEFB113Q30KQ7 82 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 SAMD5Q5TGI4 173 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 CEND1Q8N111 149 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 F8VRH5 84 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 H7C1H1 209 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 PPP1R17O96001 155 aa16.42■□□□□ 0.22
RNF39-201ENST00000244360 LGALS1P09382 135 aaKnown RBP16.42■□□□□ 0.22
RNF39-201ENST00000244360 CR1P17927 2039 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 RNF152Q8N8N0 203 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 TOMM6Q96B49 74 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 PTPN13Q12923 2485 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 NXPH4O95158 308 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 RNASE3P12724 160 aaKnown RBP16.41■□□□□ 0.22
RNF39-201ENST00000244360 NAA38Q9BRA0 125 aaKnown RBP16.41■□□□□ 0.22
RNF39-201ENST00000244360 TTTY13Q9BZ97 58 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 PHLDA3Q9Y5J5 127 aa16.41■□□□□ 0.22
RNF39-201ENST00000244360 LGALS9O00182 355 aa16.4■□□□□ 0.22
RNF39-201ENST00000244360 ZANQ9Y493 2812 aa16.4■□□□□ 0.22
RNF39-201ENST00000244360 COTL1Q14019 142 aa16.39■□□□□ 0.22
RNF39-201ENST00000244360 Q5PR19 223 aa16.39■□□□□ 0.22
RNF39-201ENST00000244360 ODF3Q96PU9 254 aa16.39■□□□□ 0.22
RNF39-201ENST00000244360 PRRC2AP48634 2157 aaKnown RBP16.39■□□□□ 0.21
RNF39-201ENST00000244360 GNRH2O43555 120 aa16.39■□□□□ 0.21
RNF39-201ENST00000244360 RASL10AQ92737 203 aa16.39■□□□□ 0.21
RNF39-201ENST00000244360 SCGB3A1Q96QR1 104 aa16.38■□□□□ 0.21
RNF39-201ENST00000244360 LINC01619G3V211 115 aa16.38■□□□□ 0.21
RNF39-201ENST00000244360 NEGR1Q7Z3B1 354 aa16.38■□□□□ 0.21
RNF39-201ENST00000244360 UBE2E2Q96LR5 201 aa16.38■□□□□ 0.21
RNF39-201ENST00000244360 HOXA3O43365 443 aaPredicted RBP16.37■□□□□ 0.21
RNF39-201ENST00000244360 SPRY2O43597 315 aa16.37■□□□□ 0.21
RNF39-201ENST00000244360 PHLDA1Q8WV24 401 aaPredicted RBP16.37■□□□□ 0.21
RNF39-201ENST00000244360 K7EQG2 157 aa16.37■□□□□ 0.21
RNF39-201ENST00000244360 POM121L12Q8N7R1 296 aa16.37■□□□□ 0.21
RNF39-201ENST00000244360 CHTOPQ9Y3Y2 248 aaKnown RBP16.37■□□□□ 0.21
RNF39-201ENST00000244360 IGHV4OR15-8A0A075B7B6 117 aa16.36■□□□□ 0.21
RNF39-201ENST00000244360 A0A087WW49 117 aa16.36■□□□□ 0.21
RNF39-201ENST00000244360 SYNJ2BPP57105 145 aa16.35■□□□□ 0.21
RNF39-201ENST00000244360 C14orf178Q8N769 122 aaPredicted RBP16.35■□□□□ 0.21
RNF39-201ENST00000244360 MAPKAPK5-AS1Q8N8E1 139 aa16.35■□□□□ 0.21
RNF39-201ENST00000244360 NEXN-AS1Q8NBZ9 246 aa16.35■□□□□ 0.21
RNF39-201ENST00000244360 NAV2Q8IVL1 2488 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms