RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TRBV7-1A0A0A6YYK4 115 aa9.96□□□□□ -0.81
VAMP4-201ENST00000236192 BUB1B-PAK6H3BSN5 160 aa9.96□□□□□ -0.81
VAMP4-201ENST00000236192 A0A0J9YXV3 536 aa9.96□□□□□ -0.81
VAMP4-201ENST00000236192 A0A0J9YXY3 114 aa9.96□□□□□ -0.81
VAMP4-201ENST00000236192 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.81
VAMP4-201ENST00000236192 MED12LQ86YW9 2145 aa9.96□□□□□ -0.81
VAMP4-201ENST00000236192 LST1O00453 97 aa9.96□□□□□ -0.82
VAMP4-201ENST00000236192 MRPS36P82909 103 aaKnown RBP9.96□□□□□ -0.82
VAMP4-201ENST00000236192 ATP5EP2Q5VTU8 51 aa9.96□□□□□ -0.82
VAMP4-201ENST00000236192 IGHV1-69P01742 117 aa9.96□□□□□ -0.82
VAMP4-201ENST00000236192 FANCD2OSQ96PS1 177 aa9.96□□□□□ -0.82
VAMP4-201ENST00000236192 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
VAMP4-201ENST00000236192 MRPL36Q9P0J6 103 aaKnown RBP9.95□□□□□ -0.82
VAMP4-201ENST00000236192 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
VAMP4-201ENST00000236192 C1orf159Q96HA4 380 aa9.95□□□□□ -0.82
VAMP4-201ENST00000236192 LINC01587Q99440 93 aa9.95□□□□□ -0.82
VAMP4-201ENST00000236192 PRB3Q04118 309 aaPredicted RBP9.95□□□□□ -0.82
VAMP4-201ENST00000236192 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
VAMP4-201ENST00000236192 MBD3L2Q8NHZ7 208 aaPredicted RBP9.94□□□□□ -0.82
VAMP4-201ENST00000236192 MRPL53Q96EL3 112 aaKnown RBP9.94□□□□□ -0.82
VAMP4-201ENST00000236192 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 KIAA1549LQ6ZVL6 1849 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 J3QLI3 93 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 CRIP1P50238 77 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
VAMP4-201ENST00000236192 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 C14orf132Q9NPU4 83 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 DAND5Q8N907 189 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 Q9H8V8 135 aa9.94□□□□□ -0.82
VAMP4-201ENST00000236192 KIAA0100Q14667 2235 aaKnown RBP9.93□□□□□ -0.82
VAMP4-201ENST00000236192 CRYGAP11844 174 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 LENEPQ9Y5L5 61 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 I3L2K1 104 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 DAD1P61803 113 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
VAMP4-201ENST00000236192 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
VAMP4-201ENST00000236192 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 IGKV1-17P01599 117 aa9.93□□□□□ -0.82
VAMP4-201ENST00000236192 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
VAMP4-201ENST00000236192 ADAMTS9Q9P2N4 1935 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 SAP25Q8TEE9 199 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 ZNF22P17026 224 aaPredicted RBP9.92□□□□□ -0.82
VAMP4-201ENST00000236192 TMEM61Q8N0U2 210 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 PRORYQ9H606 182 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 SPRY2O43597 315 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 NHLRC4P0CG21 123 aaPredicted RBP9.92□□□□□ -0.82
VAMP4-201ENST00000236192 NSUN5P1Q3KNT7 163 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 SUMO4Q6EEV6 95 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 C9orf106Q8NAJ2 232 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 ZNRF2Q8NHG8 242 aa9.92□□□□□ -0.82
VAMP4-201ENST00000236192 B9A039 149 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 NDUFC1O43677 76 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 TIMM17BO60830 172 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 PROP1O75360 226 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 DPH3Q96FX2 82 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 SPRR3Q9UBC9 169 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 GATA4P43694 442 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
VAMP4-201ENST00000236192 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
VAMP4-201ENST00000236192 ZNF80P51504 273 aaPredicted RBP9.9□□□□□ -0.82
VAMP4-201ENST00000236192 Q6JHZ5 121 aa9.9□□□□□ -0.82
VAMP4-201ENST00000236192 Q6ZS46 218 aa9.9□□□□□ -0.82
VAMP4-201ENST00000236192 THADAQ6YHU6 1953 aa9.9□□□□□ -0.82
VAMP4-201ENST00000236192 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.83
VAMP4-201ENST00000236192 THSD7BQ9C0I4 1608 aa9.9□□□□□ -0.83
VAMP4-201ENST00000236192 E7EUB6 86 aa9.89□□□□□ -0.83
VAMP4-201ENST00000236192 TMEM178BH3BS89 294 aa9.89□□□□□ -0.83
VAMP4-201ENST00000236192 WIPF1O43516 503 aa9.89□□□□□ -0.83
VAMP4-201ENST00000236192 DKK1O94907 266 aa9.89□□□□□ -0.83
VAMP4-201ENST00000236192 Q9HAA7 133 aa9.89□□□□□ -0.83
VAMP4-201ENST00000236192 TET1Q8NFU7 2136 aa9.89□□□□□ -0.83
VAMP4-201ENST00000236192 DAZAP2Q15038 168 aaPredicted RBP9.88□□□□□ -0.83
VAMP4-201ENST00000236192 RNASE13Q5GAN3 156 aaKnown RBP9.88□□□□□ -0.83
VAMP4-201ENST00000236192 MBD3L4A6NDZ8 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP4-201ENST00000236192 MBD3L3A6NE82 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP4-201ENST00000236192 MBD3L5A6NJ08 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP4-201ENST00000236192 F8WDY8 70 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 BUB3O43684 328 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 MED14OSP0DP75 135 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 COL8A2P25067 703 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 TIRAPP58753 221 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
VAMP4-201ENST00000236192 DYSFO75923 2080 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 IGHV3OR16-12A0A075B7B8 117 aa9.88□□□□□ -0.83
VAMP4-201ENST00000236192 GNRH2O43555 120 aa9.87□□□□□ -0.83
VAMP4-201ENST00000236192 PF4P02776 101 aa9.87□□□□□ -0.83
VAMP4-201ENST00000236192 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
VAMP4-201ENST00000236192 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
VAMP4-201ENST00000236192 K7EIM0 57 aa9.87□□□□□ -0.83
VAMP4-201ENST00000236192 IGLV2-23P01705 113 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 Q0VFX4 171 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 NRACQ8N912 160 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 RETNQ9HD89 108 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms