RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 CXCL1P09341 107 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 S100A2P29034 98 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 DEFB1P60022 68 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 PATE2Q6UY27 113 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 DPPA3Q6W0C5 159 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 NRG4Q8WWG1 115 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 ASB13Q8WXK3 278 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 FUNDC2Q9BWH2 189 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 NKX6-2Q9C056 277 aaPredicted RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 Q9HAA7 133 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 LOC389332A0A1B0GUA5 103 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 NDUFB6O95139 128 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 ATP6V1G2O95670 118 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 Q8TAT8 98 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 VAMP8Q9BV40 100 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 IGKV2D-24A0A075B6R9 120 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 BORCS7-ASMTA0A0B4J1R7 106 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-16A0A0C4DH30 117 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 TSTD3H0UI37 97 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 CCSO14618 274 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 MBP02144 154 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 GIPP09681 153 aaPredicted RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 CNBPP62633 177 aaKnown RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 CTAG1AP78358 180 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 SMAGPQ0VAQ4 97 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 DNLZQ5SXM8 178 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 LCE1DQ5T752 114 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 BORCS7Q96B45 105 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 SLIRPQ9GZT3 109 aaKnown RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 C9orf118A6NHY6 69 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 H7C1H1 209 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 SSSCA1O60232 199 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-53P01767 116 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 METTL15P1P0C7V9 234 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 BTN1A1Q13410 526 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CIRBPQ14011 172 aaKnown RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 SMUG1Q53HV7 270 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 TRIQKQ629K1 86 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 WDR73Q6P4I2 378 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 SPINK6Q6UWN8 80 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 NRARPQ7Z6K4 114 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 TCTE3Q8IZS6 198 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 C5orf17Q8NAS9 161 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 OR10G8Q8NGN5 311 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 MITD1Q8WV92 249 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 PARD6GQ9BYG4 376 aaPredicted RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 SRRM2Q9UQ35 2752 aaKnown RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 STAG3L2P0CL84 134 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 S100A4P26447 101 aaKnown RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 ASIPP42127 132 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 LSM3P62310 102 aaKnown RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 UBE2L3P68036 154 aaKnown RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 Q6ZNX1 250 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF664Q8N3J9 261 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CIRBP-AS1Q8TBR5 109 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 MBD3L1Q8WWY6 194 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF479Q96JC4 524 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 KRTAP9-3Q9BYQ3 159 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 C11orf21Q9P2W6 132 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CBY1Q9Y3M2 126 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 C9orf170A2RU37 121 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 KRTAP9-7A8MTY7 169 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 PRAC2D3DTV9 90 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 LINC00694P0DN24 101 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 GATA2P23769 480 aaPredicted RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CAV2P51636 162 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 NCS1P62166 190 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 PPP1R1AQ13522 171 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF876PQ49A33 203 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 OR11H4Q8NGC9 324 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 BTF3L4Q96K17 158 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 C9orf85Q96MD7 179 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 MGST2Q99735 147 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 TMEM167BQ9NRX6 74 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 HSPG2P98160 4391 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 F6UZH7 168 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 H3BQ15 152 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CTDSP2O14595 271 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-30P01768 117 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-33P01772 117 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-30-3P0DP02 117 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-30-5P0DP03 117 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 FGF7P21781 194 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 NDUFA6P56556 154 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CD300CQ08708 224 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 LCE4AQ5TA78 99 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 SCGB1C1Q8TD33 95 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 LINC01600Q96MT4 127 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 H3BP45 60 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 NDUFB4O95168 129 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 STAG3L3P0CL85 134 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 RRAS2P62070 204 aaPredicted RBP1.5□□□□□ -2.17
PRKD3-201ENST00000234179 RHEBQ15382 184 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 IGFL4Q6B9Z1 124 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 SMIM15Q7Z3B0 74 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 ZFP82Q8N141 532 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 DNAJC30Q96LL9 226 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 CCDC32Q9BV29 185 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 TREM1Q9NP99 234 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms