RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
ITGA4-201ENST00000233573 F8P00451 2351 aa11.88□□□□□ -0.51
ITGA4-201ENST00000233573 DPF1Q92782 380 aa11.88□□□□□ -0.51
ITGA4-201ENST00000233573 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
ITGA4-201ENST00000233573 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
ITGA4-201ENST00000233573 LEPP41159 167 aa11.87□□□□□ -0.51
ITGA4-201ENST00000233573 ZNF124Q15973 351 aa11.87□□□□□ -0.51
ITGA4-201ENST00000233573 GATA1P15976 413 aaPredicted RBP11.87□□□□□ -0.51
ITGA4-201ENST00000233573 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
ITGA4-201ENST00000233573 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
ITGA4-201ENST00000233573 ZNF747Q9BV97 191 aa11.87□□□□□ -0.51
ITGA4-201ENST00000233573 HSPB8Q9UJY1 196 aa11.87□□□□□ -0.51
ITGA4-201ENST00000233573 TRAV2A0A0B4J234 112 aa11.86□□□□□ -0.51
ITGA4-201ENST00000233573 C7orf71A4D174 169 aa11.86□□□□□ -0.51
ITGA4-201ENST00000233573 SPRY2O43597 315 aa11.86□□□□□ -0.51
ITGA4-201ENST00000233573 AMTNQ6UX39 209 aa11.86□□□□□ -0.51
ITGA4-201ENST00000233573 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 NXPH4O95158 308 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 S100A4P26447 101 aaKnown RBP11.85□□□□□ -0.51
ITGA4-201ENST00000233573 SMIM15Q7Z3B0 74 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 DEFB125Q8N687 156 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 NRACQ8N912 160 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 JMJD8Q96S16 334 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
ITGA4-201ENST00000233573 AGRNO00468 2067 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 TRAV12-3A0A0B4J271 114 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 PRSS47A8MTI9 375 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 FHL3Q13643 280 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 ATOH7Q8N100 152 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 RAX2Q96IS3 184 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
ITGA4-201ENST00000233573 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 DUSP14O95147 198 aaKnown RBP11.84□□□□□ -0.51
ITGA4-201ENST00000233573 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 PET117Q6UWS5 81 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 MIEN1Q9BRT3 115 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 MAP1LC3CQ9BXW4 147 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 PHLDA3Q9Y5J5 127 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 MUC4Q99102 2169 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
ITGA4-201ENST00000233573 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
ITGA4-201ENST00000233573 A8MTW9 85 aa11.83□□□□□ -0.51
ITGA4-201ENST00000233573 M0R381 172 aa11.83□□□□□ -0.51
ITGA4-201ENST00000233573 NDUFA7O95182 113 aa11.83□□□□□ -0.51
ITGA4-201ENST00000233573 CDKN1BP46527 198 aa11.83□□□□□ -0.51
ITGA4-201ENST00000233573 FAM159AQ6UWV7 190 aa11.83□□□□□ -0.51
ITGA4-201ENST00000233573 OR2K2Q8NGT1 345 aa11.83□□□□□ -0.51
ITGA4-201ENST00000233573 TRAV26-2A0A0B4J265 109 aa11.83□□□□□ -0.52
ITGA4-201ENST00000233573 IGKV3-20P01619 116 aa11.83□□□□□ -0.52
ITGA4-201ENST00000233573 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
ITGA4-201ENST00000233573 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 TRAV9-2A0A087WT02 112 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 CRLF1O75462 422 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 PROK1P58294 105 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 DEFB114Q30KQ6 69 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 MRAP2Q96G30 205 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 NXT2Q9NPJ8 142 aaKnown RBP11.82□□□□□ -0.52
ITGA4-201ENST00000233573 TCAPO15273 167 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 HBDP02042 147 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 TSPOP30536 169 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 SPINK13Q1W4C9 94 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 LINC01545Q5VT33 79 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 DPH3P1Q9H4G8 78 aa11.82□□□□□ -0.52
ITGA4-201ENST00000233573 SORL1Q92673 2214 aa11.81□□□□□ -0.52
ITGA4-201ENST00000233573 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
ITGA4-201ENST00000233573 FXYD7P58549 80 aa11.81□□□□□ -0.52
ITGA4-201ENST00000233573 POM121L12Q8N7R1 296 aa11.81□□□□□ -0.52
ITGA4-201ENST00000233573 Q8N8P6 123 aa11.81□□□□□ -0.52
ITGA4-201ENST00000233573 IGLC3P0DOY3 106 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 DEFB131AP59861 70 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 TSSC4Q9Y5U2 329 aaPredicted RBP11.8□□□□□ -0.52
ITGA4-201ENST00000233573 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 KNCNA6PVL3 124 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 CD7P09564 240 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 HLA-DRB4P13762 266 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 KRTAP10-3P60369 221 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 ZNF705AQ6ZN79 300 aaPredicted RBP11.8□□□□□ -0.52
ITGA4-201ENST00000233573 C14orf178Q8N769 122 aaPredicted RBP11.8□□□□□ -0.52
ITGA4-201ENST00000233573 C9orf85Q96MD7 179 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 HLA-DRB4X5D2U9 266 aa11.8□□□□□ -0.52
ITGA4-201ENST00000233573 C20orf202A1L168 122 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 CCL24O00175 119 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 LINC00315P59091 139 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 MRPL52Q86TS9 123 aaKnown RBP11.79□□□□□ -0.52
ITGA4-201ENST00000233573 MCRIP2Q9BUT9 160 aaKnown RBP11.79□□□□□ -0.52
ITGA4-201ENST00000233573 H3BMM0 161 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 IGLL1P15814 213 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 CD300EQ496F6 205 aaPredicted RBP11.79□□□□□ -0.52
ITGA4-201ENST00000233573 DYNLRB2Q8TF09 96 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
ITGA4-201ENST00000233573 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
ITGA4-201ENST00000233573 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
ITGA4-201ENST00000233573 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
ITGA4-201ENST00000233573 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
ITGA4-201ENST00000233573 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
ITGA4-201ENST00000233573 FCER1GP30273 86 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms