RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 JPT2Q9H910 190 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 PRRC2CQ9Y520 2896 aaKnown RBP9.92□□□□□ -0.82
MSH2-201ENST00000233146 CACNA1GO43497 2377 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 J3QQQ9 107 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 VMA21Q3ZAQ7 101 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 DSCR8Q96T75 97 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 PIMREGQ9BSJ6 248 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 DNAJC13O75165 2243 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 IGHV1OR15-9A0A0B4J2B8 117 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 I3L2K1 104 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 K7ENP7 123 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 ATOX1O00244 68 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 LHBP01229 141 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 GATA4P43694 442 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 IGHV5-10-1A0A0J9YXX1 117 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 MALP21145 153 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 LINC00477Q96M19 166 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 PRO0628Q9UI54 55 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
MSH2-201ENST00000233146 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
MSH2-201ENST00000233146 FAM216BQ8N7L0 139 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 CFHR4Q92496 578 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 ICOSQ9Y6W8 199 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 AHCTF1Q8WYP5 2266 aa9.91□□□□□ -0.82
MSH2-201ENST00000233146 IGKV3D-20A0A0C4DH25 116 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 Q0VFX4 171 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 FAM201AQ5SY85 155 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 LST1O00453 97 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 AGPAT4-IT1Q9H0P7 198 aa9.9□□□□□ -0.82
MSH2-201ENST00000233146 IGHV4-4A0A075B6R2 117 aa9.9□□□□□ -0.83
MSH2-201ENST00000233146 TSHBP01222 138 aa9.9□□□□□ -0.83
MSH2-201ENST00000233146 IGHV7-4-1A0A0J9YVY3 117 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 LGALS3P17931 250 aaKnown RBP9.89□□□□□ -0.83
MSH2-201ENST00000233146 PMS2CLQ68D20 193 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 TPRP12270 2363 aaKnown RBP9.89□□□□□ -0.83
MSH2-201ENST00000233146 UBE2E1P51965 193 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 SLC50A1Q9BRV3 221 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 IGHV1-2P23083 117 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 SPINK14Q6IE38 97 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
MSH2-201ENST00000233146 SPRY2O43597 315 aa9.88□□□□□ -0.83
MSH2-201ENST00000233146 Q6ZS52 159 aa9.88□□□□□ -0.83
MSH2-201ENST00000233146 CLEC2BQ92478 149 aa9.88□□□□□ -0.83
MSH2-201ENST00000233146 C11orf21Q9P2W6 132 aa9.88□□□□□ -0.83
MSH2-201ENST00000233146 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
MSH2-201ENST00000233146 COX6CP09669 75 aa9.88□□□□□ -0.83
MSH2-201ENST00000233146 LYZL6O75951 148 aa9.87□□□□□ -0.83
MSH2-201ENST00000233146 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
MSH2-201ENST00000233146 IGKV3-15P01624 115 aa9.87□□□□□ -0.83
MSH2-201ENST00000233146 GAFA1Q96PS6 74 aa9.87□□□□□ -0.83
MSH2-201ENST00000233146 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
MSH2-201ENST00000233146 TEX22C9J3V5 150 aa9.87□□□□□ -0.83
MSH2-201ENST00000233146 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
MSH2-201ENST00000233146 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
MSH2-201ENST00000233146 RAI1Q7Z5J4 1906 aaPredicted RBP9.86□□□□□ -0.83
MSH2-201ENST00000233146 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 DPH3P1Q9H4G8 78 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 PEMTQ9UBM1 199 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 IGHV1-69DA0A0B4J2H0 117 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 CD59P13987 128 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 RPL39LQ96EH5 51 aaKnown RBP9.85□□□□□ -0.83
MSH2-201ENST00000233146 LEPROTO15243 131 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 DLX1P56177 255 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 SPANXN1Q5VSR9 72 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 IGFL4Q6B9Z1 124 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 C8orf31Q8N9H6 132 aa9.85□□□□□ -0.83
MSH2-201ENST00000233146 K7EIM0 57 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 CCL8P80075 99 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 DYNAPQ8N1N2 210 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 CCL13Q99616 98 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
MSH2-201ENST00000233146 RHOHQ15669 191 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 A0A0J9YX75 114 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
MSH2-201ENST00000233146 FOLR3P41439 243 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 MAFAQ8NHW3 353 aaPredicted RBP9.83□□□□□ -0.84
MSH2-201ENST00000233146 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 HES7Q9BYE0 225 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 TTTY12Q9BZ98 90 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 TRAV8-3A0A0A6YYJ7 113 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 I3L3M4 83 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 ZNF876PQ49A33 203 aa9.83□□□□□ -0.84
MSH2-201ENST00000233146 SDHAF1A6NFY7 115 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 MSMPQ1L6U9 139 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 NSUN5P1Q3KNT7 163 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 LY6LH3BQJ8 138 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 IL11RAQ14626 422 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 DEFB108BQ8NET1 73 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 ENSAO43768 121 aaKnown RBP9.82□□□□□ -0.84
MSH2-201ENST00000233146 TMEM141Q96I45 108 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 DKK4Q9UBT3 224 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 SMAD5-AS1Q9Y6J3 95 aa9.82□□□□□ -0.84
MSH2-201ENST00000233146 PFN2P35080 140 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms