RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 RNF182Q8N6D2 247 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 HIGD1BQ9P298 99 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 CRLF1O75462 422 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 C4orf48Q5BLP8 95 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 TMEM78Q5T7P6 136 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 YAE1D1Q9NRH1 226 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 CCL21O00585 134 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 SLC25A16P16260 332 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 VMO1Q7Z5L0 202 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 NTN5Q8WTR8 489 aaPredicted RBP7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 C2CD3Q4AC94 2353 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 FABP5P3A8MUU1 101 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGLC6P0CF74 106 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 ZFP36P26651 326 aaKnown RBP7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 ATP5J2P56134 94 aa7.23□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV3-49A0A0A0MS15 119 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV7-81A0A0B4J1V7 117 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 ATP5LO75964 103 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 TCL1BO95988 128 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 MORN3Q6PF18 240 aaPredicted RBP7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 RNF185Q96GF1 192 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 PPDPFQ9H3Y8 114 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 TRPT1Q86TN4 253 aaKnown RBP7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 M0QXV9 152 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 LINC01559Q495D7 138 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 LYRM7Q5U5X0 104 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 C15orf53Q8NAA6 179 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 SCGB3A1Q96QR1 104 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 UBTD1Q9HAC8 227 aa7.22□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV3-64A0A075B6Q5 118 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 MYMXA0A1B0GTQ4 84 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 ECSCRQ19T08 205 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 IL17RELQ6ZVW7 336 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 COX8CQ7Z4L0 72 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 Q8N6K4 173 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 TIMD4Q96H15 378 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 PRADC1Q9BSG0 188 aa7.21□□□□□ -1.25
HLA-DOA-201ENST00000229829 TMEM262E9PQX1 116 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 K7ENP7 123 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 BRI3O95415 125 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 C15orf32Q32M92 178 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 PLEKHB2Q96CS7 222 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 HIVEP3Q5T1R4 2406 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 M0R1W7 72 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 SLC25A20O43772 301 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 NXT2Q9NPJ8 142 aaKnown RBP7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 C11orf21Q9P2W6 132 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 NCOR2Q9Y618 2525 aa7.21□□□□□ -1.26
HLA-DOA-201ENST00000229829 CHD8Q9HCK8 2581 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 SPANXN1Q5VSR9 72 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 Q8N9W7 124 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 SPTBN4Q9H254 2564 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 G3V318 75 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 ADORA2A-AS1P86434 159 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 FAM110AQ9BQ89 295 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 CHCHD5Q9BSY4 110 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 A0A1W2PPR1 153 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 BUB3O43684 328 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 MGPP08493 103 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 NHLRC4P0CG21 123 aaPredicted RBP7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 TMEM170BQ5T4T1 132 aa7.2□□□□□ -1.26
HLA-DOA-201ENST00000229829 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 IGKV3D-20A0A0C4DH25 116 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 TRGV3P03979 118 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 CRIP2P52943 208 aaPredicted RBP7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 ZNF56Q15929 161 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 ATP6V0E1O15342 81 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 LGALS1P09382 135 aaKnown RBP7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 C11orf71Q6IPW1 123 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 CLEC19AQ6UXS0 136 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 C1orf43Q9BWL3 253 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 ZFAND3Q9H8U3 227 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 CELSR2Q9HCU4 2923 aa7.19□□□□□ -1.26
HLA-DOA-201ENST00000229829 CLPSL1A2RUU4 121 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 HERVK_113P61574 105 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 LAGE3Q14657 143 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 FBXL19-AS1Q494R0 122 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 TMEM190Q8WZ59 177 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 AGPAT4-IT1Q9H0P7 198 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 M0R381 172 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 EBI3Q14213 229 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 TRAV2A0A0B4J234 112 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 PRSS2P07478 247 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 CCDC140Q96MF4 163 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 SORL1Q92673 2214 aa7.18□□□□□ -1.26
HLA-DOA-201ENST00000229829 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 CNFNQ9BYD5 112 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 LINC00527Q9UJ94 153 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 NPC2P61916 151 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 A0A087WX48 190 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 H7C1H1 209 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 TAL2Q16559 108 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 C10orf126Q8N4M7 172 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms