RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 FA2HQ7L5A8 372 aa7.95□□□□□ -1.14
CDCA3-201ENST00000229265 OR2K2Q8NGT1 345 aa7.95□□□□□ -1.14
CDCA3-201ENST00000229265 SPAG8Q99932 426 aaPredicted RBP7.95□□□□□ -1.14
CDCA3-201ENST00000229265 C20orf144Q9BQM9 153 aa7.95□□□□□ -1.14
CDCA3-201ENST00000229265 C11orf21Q9P2W6 132 aa7.95□□□□□ -1.14
CDCA3-201ENST00000229265 OR4C46A6NHA9 309 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 CSN3P07498 182 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 G0S2P27469 103 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
CDCA3-201ENST00000229265 DEFB114Q30KQ6 69 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-201ENST00000229265 RNASEKQ6P5S7 137 aaKnown RBP7.94□□□□□ -1.14
CDCA3-201ENST00000229265 ZNF664Q8N3J9 261 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 POM121L12Q8N7R1 296 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 OR10AG1Q8NH19 301 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 PTH2Q96A98 100 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 FAM110AQ9BQ89 295 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 LINC00467Q9BRT7 94 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 TMEM70Q9BUB7 260 aa7.94□□□□□ -1.14
CDCA3-201ENST00000229265 C7orf71A4D174 169 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 D6R8Y8 96 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 M0R381 172 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 NXPH4O95158 308 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 C3orf79P0CE67 100 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 ZNF705DP0CH99 300 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-201ENST00000229265 ZNF705BP0CI00 300 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-201ENST00000229265 MRPL52Q86TS9 123 aaKnown RBP7.93□□□□□ -1.14
CDCA3-201ENST00000229265 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 DLX4Q92988 240 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-201ENST00000229265 C20orf78Q9BR46 151 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 MAP1LC3CQ9BXW4 147 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
CDCA3-201ENST00000229265 CCL24O00175 119 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 ANXA2RQ3ZCQ2 193 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 ADAMTSL5Q6ZMM2 481 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 WFDC3Q8IUB2 231 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 CITED2Q99967 270 aaPredicted RBP7.92□□□□□ -1.14
CDCA3-201ENST00000229265 NDUFAF3Q9BU61 184 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 DPH3P1Q9H4G8 78 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
CDCA3-201ENST00000229265 IGHV1-24A0A0C4DH33 117 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 TNFRSF6BO95407 300 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 HLA-DRB4P13762 266 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 DDTP30046 118 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 SLURP1P55000 103 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 KRTDAPP60985 99 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 RPL32P62910 135 aaKnown RBP7.91□□□□□ -1.14
CDCA3-201ENST00000229265 Q8N8P6 123 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 HLA-DRB4X5D2U9 266 aa7.91□□□□□ -1.14
CDCA3-201ENST00000229265 IGKV3-7A0A075B6H7 116 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 TRGV11A0A075B6L2 103 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 F6UB75 175 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 H3BMM0 161 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 ZNF688P0C7X2 276 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 BEAN1Q3B7T3 259 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 OXLD1Q5BKU9 147 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 PRR9Q5T870 116 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 AMTNQ6UX39 209 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 Q8N976 141 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 SYT8Q8NBV8 401 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 VAMP8Q9BV40 100 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 MSRB1Q9NZV6 116 aa7.9□□□□□ -1.14
CDCA3-201ENST00000229265 HUWE1Q7Z6Z7 4374 aaKnown RBP7.89□□□□□ -1.15
CDCA3-201ENST00000229265 IGHV1OR15-1A0A075B7D0 117 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 KIR2DL5BA0A0G2JN68 375 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 KIR2DL5BA0A0G2JPC4 375 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 A0A1W2PRX2 142 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
CDCA3-201ENST00000229265 FCER1GP30273 86 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 IFI27P40305 119 aaPredicted RBP7.89□□□□□ -1.15
CDCA3-201ENST00000229265 NSUN5P1Q3KNT7 163 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 KIR2DL5AQ8N109 375 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 RAX2Q96IS3 184 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 AP1S3Q96PC3 154 aa7.89□□□□□ -1.15
CDCA3-201ENST00000229265 TRAV9-2A0A087WT02 112 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 TCAPO15273 167 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 GNRH2O43555 120 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 HBDP02042 147 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 EVI2AP22794 236 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 C9orf85Q96MD7 179 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 MIEN1Q9BRT3 115 aa7.88□□□□□ -1.15
CDCA3-201ENST00000229265 ZNF256Q9Y2P7 627 aaPredicted RBP7.88□□□□□ -1.15
CDCA3-201ENST00000229265 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
CDCA3-201ENST00000229265 IGHV3-16A0A0C4DH30 117 aa7.87□□□□□ -1.15
CDCA3-201ENST00000229265 H3BVH4 76 aa7.87□□□□□ -1.15
CDCA3-201ENST00000229265 NPYP01303 97 aa7.87□□□□□ -1.15
CDCA3-201ENST00000229265 SMIM17P0DL12 118 aa7.87□□□□□ -1.15
CDCA3-201ENST00000229265 EDN2P20800 178 aa7.87□□□□□ -1.15
CDCA3-201ENST00000229265 TFPI2P48307 235 aa7.87□□□□□ -1.15
CDCA3-201ENST00000229265 NUTF2P61970 127 aaKnown RBP7.87□□□□□ -1.15
CDCA3-201ENST00000229265 KIR3DS1Q14943 382 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms