RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 PPP1R17O96001 155 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 PLA2G2AP14555 144 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
SF3A2-201ENST00000221494 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
SF3A2-201ENST00000221494 F8WDY8 70 aa12.17□□□□□ -0.46
SF3A2-201ENST00000221494 HOXA3O43365 443 aaPredicted RBP12.17□□□□□ -0.46
SF3A2-201ENST00000221494 PRB4P10163 310 aaPredicted RBP12.17□□□□□ -0.46
SF3A2-201ENST00000221494 NEXN-AS1Q8NBZ9 246 aa12.17□□□□□ -0.46
SF3A2-201ENST00000221494 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
SF3A2-201ENST00000221494 TENM4Q6N022 2769 aa12.17□□□□□ -0.46
SF3A2-201ENST00000221494 ETDBQ3ZM63 59 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 SPANXN1Q5VSR9 72 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 C10orf105Q8TEF2 133 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
SF3A2-201ENST00000221494 C1QTNF4Q9BXJ3 329 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
SF3A2-201ENST00000221494 J3QKU1 62 aa12.15□□□□□ -0.46
SF3A2-201ENST00000221494 RPL32P62910 135 aaKnown RBP12.15□□□□□ -0.46
SF3A2-201ENST00000221494 PAPPA-AS1Q5QFB9 102 aa12.15□□□□□ -0.46
SF3A2-201ENST00000221494 SCGB3A1Q96QR1 104 aa12.15□□□□□ -0.46
SF3A2-201ENST00000221494 UFC1Q9Y3C8 167 aa12.15□□□□□ -0.46
SF3A2-201ENST00000221494 U3KQE9 123 aa12.15□□□□□ -0.46
SF3A2-201ENST00000221494 CELSR2Q9HCU4 2923 aa12.15□□□□□ -0.46
SF3A2-201ENST00000221494 AGRNO00468 2067 aa12.15□□□□□ -0.47
SF3A2-201ENST00000221494 CENPEQ02224 2701 aa12.15□□□□□ -0.47
SF3A2-201ENST00000221494 LGALS1P09382 135 aaKnown RBP12.14□□□□□ -0.47
SF3A2-201ENST00000221494 PPIFP30405 207 aaKnown RBP12.14□□□□□ -0.47
SF3A2-201ENST00000221494 KLRD1Q13241 179 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
SF3A2-201ENST00000221494 VMO1Q7Z5L0 202 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 TRAV8-2A0A0B4J237 113 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 IGHV3-23P01764 117 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 UBE2D1P51668 147 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
SF3A2-201ENST00000221494 CFAP126Q5VTH2 177 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 METTL26Q96S19 204 aa12.14□□□□□ -0.47
SF3A2-201ENST00000221494 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
SF3A2-201ENST00000221494 CLPSL1A2RUU4 121 aa12.13□□□□□ -0.47
SF3A2-201ENST00000221494 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
SF3A2-201ENST00000221494 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
SF3A2-201ENST00000221494 Q8N9W7 124 aa12.13□□□□□ -0.47
SF3A2-201ENST00000221494 PIMREGQ9BSJ6 248 aa12.13□□□□□ -0.47
SF3A2-201ENST00000221494 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 APOMO95445 188 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 C9orf139Q6ZV77 190 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 RNF182Q8N6D2 247 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 VPS13CQ709C8 3753 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 IGHV4-61A0A0C4DH41 118 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 M0QXV9 152 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 FOXI1Q12951 378 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 C8orf86Q6ZUL3 223 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 EEF1AKMT3Q96AZ1 226 aa12.12□□□□□ -0.47
SF3A2-201ENST00000221494 ARHGAP32A7KAX9 2087 aa12.11□□□□□ -0.47
SF3A2-201ENST00000221494 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
SF3A2-201ENST00000221494 LINC00477Q96M19 166 aa12.11□□□□□ -0.47
SF3A2-201ENST00000221494 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
SF3A2-201ENST00000221494 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
SF3A2-201ENST00000221494 CYSLTR1Q9Y271 337 aa12.11□□□□□ -0.47
SF3A2-201ENST00000221494 PTPN13Q12923 2485 aa12.11□□□□□ -0.47
SF3A2-201ENST00000221494 UBE2D3P61077 147 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 UBE2D2P62837 147 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 CSMD2Q7Z408 3487 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 TRBV20-1A0A075B6N2 111 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 TRAV26-2A0A0B4J265 109 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 HERVK_113P61574 105 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 AMTNQ6UX39 209 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
SF3A2-201ENST00000221494 RASL10AQ92737 203 aa12.09□□□□□ -0.47
SF3A2-201ENST00000221494 HELZ2Q9BYK8 2649 aaKnown RBP12.09□□□□□ -0.47
SF3A2-201ENST00000221494 TRAV21A0A0B4J279 112 aa12.09□□□□□ -0.47
SF3A2-201ENST00000221494 H3BVH4 76 aa12.09□□□□□ -0.47
SF3A2-201ENST00000221494 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
SF3A2-201ENST00000221494 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
SF3A2-201ENST00000221494 POLQO75417 2590 aa12.08□□□□□ -0.48
SF3A2-201ENST00000221494 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
SF3A2-201ENST00000221494 OVOL1O14753 267 aa12.08□□□□□ -0.48
SF3A2-201ENST00000221494 DSCR9P59020 149 aa12.08□□□□□ -0.48
SF3A2-201ENST00000221494 SBSPONQ8IVN8 264 aa12.08□□□□□ -0.48
SF3A2-201ENST00000221494 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
SF3A2-201ENST00000221494 MAP1AP78559 2803 aaPredicted RBP12.08□□□□□ -0.48
SF3A2-201ENST00000221494 ASIPP42127 132 aa12.07□□□□□ -0.48
SF3A2-201ENST00000221494 SMIM20Q8N5G0 67 aa12.07□□□□□ -0.48
SF3A2-201ENST00000221494 PPDPFLQ8WWR9 84 aa12.07□□□□□ -0.48
SF3A2-201ENST00000221494 PTH2Q96A98 100 aa12.07□□□□□ -0.48
SF3A2-201ENST00000221494 PRSS29PA6NIE9 313 aa12.06□□□□□ -0.48
SF3A2-201ENST00000221494 NXPH4O95158 308 aa12.06□□□□□ -0.48
SF3A2-201ENST00000221494 CD7P09564 240 aa12.06□□□□□ -0.48
SF3A2-201ENST00000221494 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
SF3A2-201ENST00000221494 SVEP1Q4LDE5 3571 aa12.06□□□□□ -0.48
SF3A2-201ENST00000221494 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
SF3A2-201ENST00000221494 SCGB1D4Q6XE38 83 aa12.05□□□□□ -0.48
SF3A2-201ENST00000221494 TEN1Q86WV5 123 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms