RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ATP5J2P56134 94 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 ODF1Q14990 250 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 Q8N6K4 173 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 WFDC2Q14508 124 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 LGALS9BQ3B8N2 356 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 LGALS9CQ6DKI2 356 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 KLHL30-AS1Q8NEE0 82 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 SCGB3A1Q96QR1 104 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 CHAC1Q9BUX1 264 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 MUC4Q99102 2169 aa11.5□□□□□ -0.57
EFNB1-201ENST00000204961 A0A1B0GW15 77 aa11.49□□□□□ -0.57
EFNB1-201ENST00000204961 ETDBQ3ZM63 59 aa11.49□□□□□ -0.57
EFNB1-201ENST00000204961 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 H3BMG7 143 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.48□□□□□ -0.57
EFNB1-201ENST00000204961 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 SRSF8Q9BRL6 282 aaKnown RBP11.48□□□□□ -0.57
EFNB1-201ENST00000204961 KHDC1LQ5JSQ8 128 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 KLK9Q9UKQ9 250 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 MINOS1Q5TGZ0 78 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 AJUBAQ96IF1 538 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 MINOS1-NBL1R4GNA1 71 aa11.48□□□□□ -0.57
EFNB1-201ENST00000204961 DPM2O94777 84 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 LAGE3Q14657 143 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 H7C2G1 150 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
EFNB1-201ENST00000204961 RPL39P62891 51 aaKnown RBP11.47□□□□□ -0.57
EFNB1-201ENST00000204961 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
EFNB1-201ENST00000204961 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.57
EFNB1-201ENST00000204961 OR9G4Q8NGQ1 327 aa11.46□□□□□ -0.57
EFNB1-201ENST00000204961 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.58
EFNB1-201ENST00000204961 APOMO95445 188 aa11.46□□□□□ -0.58
EFNB1-201ENST00000204961 CD7P09564 240 aa11.46□□□□□ -0.58
EFNB1-201ENST00000204961 DPF1Q92782 380 aa11.46□□□□□ -0.58
EFNB1-201ENST00000204961 NBEAL2Q6ZNJ1 2754 aa11.46□□□□□ -0.58
EFNB1-201ENST00000204961 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
EFNB1-201ENST00000204961 NXT2Q9NPJ8 142 aaKnown RBP11.45□□□□□ -0.58
EFNB1-201ENST00000204961 HHLA3Q9XRX5 114 aa11.45□□□□□ -0.58
EFNB1-201ENST00000204961 AVPP01185 164 aa11.45□□□□□ -0.58
EFNB1-201ENST00000204961 OR5A1Q8NGJ0 315 aa11.45□□□□□ -0.58
EFNB1-201ENST00000204961 U3KQK5 164 aa11.45□□□□□ -0.58
EFNB1-201ENST00000204961 INSL3P51460 131 aa11.44□□□□□ -0.58
EFNB1-201ENST00000204961 FBXL19-AS1Q494R0 122 aa11.44□□□□□ -0.58
EFNB1-201ENST00000204961 PSMG4Q5JS54 123 aa11.44□□□□□ -0.58
EFNB1-201ENST00000204961 LOC107984156A0A0G2JMH3 177 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 KNCNA6PVL3 124 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
EFNB1-201ENST00000204961 LINC01559Q495D7 138 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 RNASE13Q5GAN3 156 aaKnown RBP11.43□□□□□ -0.58
EFNB1-201ENST00000204961 ARL17AQ8IVW1 177 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 SIGMAR1Q99720 223 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 CHTOPQ9Y3Y2 248 aaKnown RBP11.43□□□□□ -0.58
EFNB1-201ENST00000204961 DUSP14O95147 198 aaKnown RBP11.43□□□□□ -0.58
EFNB1-201ENST00000204961 PRB1P04280 392 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 Q8N8P6 123 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 CCL19Q99731 98 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 TRBV6-1A0A0K0K1D8 114 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 ASIPP42127 132 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
EFNB1-201ENST00000204961 ITLN2Q8WWU7 325 aaPredicted RBP11.42□□□□□ -0.58
EFNB1-201ENST00000204961 SRSF1Q07955 248 aaKnown RBP eCLIP11.42□□□□□ -0.58
EFNB1-201ENST00000204961 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 NRACQ8N912 160 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 ZNF479Q96JC4 524 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 FLNAP21333 2647 aaKnown RBP11.42□□□□□ -0.58
EFNB1-201ENST00000204961 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 SPINK13Q1W4C9 94 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 C2orf66Q6UXQ4 117 aa11.42□□□□□ -0.58
EFNB1-201ENST00000204961 GATD1Q8NB37 220 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 GAGE12HA6NDE8 117 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 IGHV4-59P01825 116 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 SUMO2P61956 95 aaKnown RBP11.41□□□□□ -0.58
EFNB1-201ENST00000204961 EBI3Q14213 229 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 PIFOQ8TCI5 191 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
EFNB1-201ENST00000204961 TRBV7-1A0A0A6YYK4 115 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 SLC25A16P16260 332 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 GPHB5Q86YW7 130 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 OR11H1Q8NG94 326 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 OR11H2Q8NH07 326 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 RASL10AQ92737 203 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 ZNF56Q15929 161 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.58
EFNB1-201ENST00000204961 SMIM2Q9BVW6 85 aa11.4□□□□□ -0.58
EFNB1-201ENST00000204961 ADARB2-AS1A8MUL3 147 aa11.4□□□□□ -0.59
EFNB1-201ENST00000204961 SYNJ2BPP57105 145 aa11.4□□□□□ -0.59
EFNB1-201ENST00000204961 FAM159AQ6UWV7 190 aa11.4□□□□□ -0.59
EFNB1-201ENST00000204961 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
EFNB1-201ENST00000204961 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
EFNB1-201ENST00000204961 MDFICQ9P1T7 246 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms