RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 MPZP25189 248 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 ADAMTSL5Q6ZMM2 481 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 MRPL55Q7Z7F7 128 aaKnown RBP2.72□□□□□ -1.97
NEB-201ENST00000172853 KLHDC3Q9BQ90 382 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 K7EMI3 77 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 Q8N976 141 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 C20orf78Q9BR46 151 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 PTPRDP23468 1912 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 A0A087X0K7 114 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 ARHGEF17Q96PE2 2063 aaPredicted RBP2.72□□□□□ -1.97
NEB-201ENST00000172853 IGLV5-52A0A0A0MRZ9 124 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 RPL28P46779 137 aaKnown RBP2.72□□□□□ -1.97
NEB-201ENST00000172853 Q9H8V8 135 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 PLXNA3P51805 1871 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.72□□□□□ -1.97
NEB-201ENST00000172853 IGLV2-18A0A075B6J9 118 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 IGKV1-12A0A0C4DH73 117 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 Q6Q795 121 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 PPDPFLQ8WWR9 84 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 LENEPQ9Y5L5 61 aa2.72□□□□□ -1.97
NEB-201ENST00000172853 A0A0B4J2C4 111 aa2.71□□□□□ -1.97
NEB-201ENST00000172853 PRB4P10163 310 aaPredicted RBP2.71□□□□□ -1.97
NEB-201ENST00000172853 ESM1Q9NQ30 184 aa2.71□□□□□ -1.97
NEB-201ENST00000172853 X6R8D5 127 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 IGKV1-9A0A0C4DH69 117 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 FAM110AQ9BQ89 295 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 SCN1AP35498 2009 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 FANCMQ8IYD8 2048 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 IGKV1D-8A0A087WSZ0 117 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 A0A0G2JRQ6 117 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 C15orf62A8K5M9 175 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 EDN2P20800 178 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 ETDBQ3ZM63 59 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 NUP35Q8NFH5 326 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 TEX49A0A1B0GTD5 131 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 Q86TA4 180 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 SIVA1O15304 175 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 DAZAP2Q15038 168 aaPredicted RBP2.71□□□□□ -1.98
NEB-201ENST00000172853 PRR4Q16378 134 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 ZDBF2Q9HCK1 2354 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 LOC107984640A0A0U1RRK4 108 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 CTHRC1Q96CG8 243 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 IGLV3-32A0A0A0MS00 114 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 PINLYPA6NC86 204 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 COLCA2A8K830 154 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 PCNX1Q96RV3 2341 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 RIF1Q5UIP0 2472 aaKnown RBP2.71□□□□□ -1.98
NEB-201ENST00000172853 DEFB136Q30KP8 78 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 TREML4Q6UXN2 200 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 CARHSP1Q9Y2V2 147 aaKnown RBP2.71□□□□□ -1.98
NEB-201ENST00000172853 FREM3P0C091 2139 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 ZNF318Q5VUA4 2279 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 FER1L5A0AVI2 2057 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 INAFM1C9JVW0 142 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 A0A087WV48 116 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 PRSS57Q6UWY2 283 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 KIAA1549LQ6ZVL6 1849 aa2.71□□□□□ -1.98
NEB-201ENST00000172853 TRBV7-3A0A075B6L6 115 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 A6NDX4 124 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 TMEM263Q8WUH6 116 aaKnown RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 PRR25Q96S07 402 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 LINC00311Q8N616 119 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 PTPRSQ13332 1948 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 SPTAN1Q13813 2472 aaKnown RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 MIFP14174 115 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 ALPK2Q86TB3 2170 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 IGHV4-30-2A0A087WSY4 118 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 HIST3H2BBQ8N257 126 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 IGKV2-29A2NJV5 120 aaPredicted RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 ATOX1O00244 68 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 PYY3Q5JQD4 70 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 Q8TCH9 128 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 IGKV1-8A0A0C4DH67 115 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 LIMD2Q9BT23 127 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 FAM231BA6NCW3 169 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 CD55P08174 381 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 PLA2G2AP14555 144 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 ZNF843Q8N446 348 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 RTTNQ86VV8 2226 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 WT1P19544 449 aaPredicted RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 C10orf55Q5SWW7 151 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 SPTBN4Q9H254 2564 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 H3BRN7 92 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 IGF1P05019 195 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 CACNA1DQ01668 2161 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 SMKR1H3BMG3 65 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 HLA-DMBP28068 263 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 FRMD6-AS1P0C7T7 363 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 NHLRC4P0CG21 123 aaPredicted RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 ESPL1Q14674 2120 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 RETNQ9HD89 108 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 F8VRH5 84 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 NCOR1P1Q9H4R4 102 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 NPDC1Q9NQX5 325 aaPredicted RBP2.7□□□□□ -1.98
NEB-201ENST00000172853 LY6LH3BQJ8 138 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 J3QQQ9 107 aa2.7□□□□□ -1.98
NEB-201ENST00000172853 CXCL1P09341 107 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms