RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TGFAP01135 160 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 BBC3Q96PG8 261 aaPredicted RBP9.96□□□□□ -0.81
CTNS-201ENST00000046640 SONP18583 2426 aaKnown RBP9.96□□□□□ -0.82
CTNS-201ENST00000046640 MYO9AB2RTY4 2548 aa9.96□□□□□ -0.82
CTNS-201ENST00000046640 DEFB112Q30KQ8 113 aa9.96□□□□□ -0.82
CTNS-201ENST00000046640 PSMG3-AS1Q96PY0 264 aa9.96□□□□□ -0.82
CTNS-201ENST00000046640 RHPN1-AS1Q9BWJ2 59 aa9.96□□□□□ -0.82
CTNS-201ENST00000046640 RBAKDNA6NC62 111 aa9.95□□□□□ -0.82
CTNS-201ENST00000046640 SIVA1O15304 175 aa9.95□□□□□ -0.82
CTNS-201ENST00000046640 NDUFA4O00483 81 aa9.94□□□□□ -0.82
CTNS-201ENST00000046640 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
CTNS-201ENST00000046640 SAMD13Q5VXD3 122 aa9.94□□□□□ -0.82
CTNS-201ENST00000046640 Q8N8P6 123 aa9.94□□□□□ -0.82
CTNS-201ENST00000046640 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
CTNS-201ENST00000046640 AMTNQ6UX39 209 aa9.94□□□□□ -0.82
CTNS-201ENST00000046640 C9orf47Q6ZRZ4 202 aa9.94□□□□□ -0.82
CTNS-201ENST00000046640 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 LAGE3Q14657 143 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 CCDC168Q8NDH2 2452 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 RNF223E7ERA6 249 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 KRTAP10-9P60411 292 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 C9orf139Q6ZV77 190 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
CTNS-201ENST00000046640 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 MGPP08493 103 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 CRIP2P52943 208 aaPredicted RBP9.92□□□□□ -0.82
CTNS-201ENST00000046640 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 USMG5Q96IX5 58 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 IGLV2-18A0A075B6J9 118 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 GNRH2O43555 120 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
CTNS-201ENST00000046640 CEND1Q8N111 149 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 NRACQ8N912 160 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
CTNS-201ENST00000046640 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 ZMAT4Q9H898 229 aa9.92□□□□□ -0.82
CTNS-201ENST00000046640 C14orf178Q8N769 122 aaPredicted RBP9.91□□□□□ -0.82
CTNS-201ENST00000046640 SETD2Q9BYW2 2564 aaPredicted RBP9.91□□□□□ -0.82
CTNS-201ENST00000046640 H3BMG7 143 aa9.91□□□□□ -0.82
CTNS-201ENST00000046640 ATP5LO75964 103 aa9.91□□□□□ -0.82
CTNS-201ENST00000046640 AZU1P20160 251 aa9.91□□□□□ -0.82
CTNS-201ENST00000046640 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
CTNS-201ENST00000046640 WFDC2Q14508 124 aa9.91□□□□□ -0.82
CTNS-201ENST00000046640 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
CTNS-201ENST00000046640 EMP1P54849 157 aa9.9□□□□□ -0.82
CTNS-201ENST00000046640 SOCS3O14543 225 aa9.9□□□□□ -0.82
CTNS-201ENST00000046640 IGLV1-40P01703 118 aa9.9□□□□□ -0.82
CTNS-201ENST00000046640 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
CTNS-201ENST00000046640 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
CTNS-201ENST00000046640 SRSF2Q01130 221 aaKnown RBP9.89□□□□□ -0.83
CTNS-201ENST00000046640 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTNS-201ENST00000046640 SH2D6Q7Z4S9 175 aa9.89□□□□□ -0.83
CTNS-201ENST00000046640 CYSLTR1Q9Y271 337 aa9.89□□□□□ -0.83
CTNS-201ENST00000046640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
CTNS-201ENST00000046640 MRPL53Q96EL3 112 aaKnown RBP9.89□□□□□ -0.83
CTNS-201ENST00000046640 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
CTNS-201ENST00000046640 BEX4Q9NWD9 120 aaPredicted RBP9.89□□□□□ -0.83
CTNS-201ENST00000046640 LINC01356Q8N9X3 169 aa9.89□□□□□ -0.83
CTNS-201ENST00000046640 A0A087WX48 190 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 COX6B1P14854 86 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 ZNF479Q96JC4 524 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 LINC00477Q96M19 166 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 SCGB2A2Q13296 93 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 PHLDA1Q8WV24 401 aaPredicted RBP9.88□□□□□ -0.83
CTNS-201ENST00000046640 SMPXQ9UHP9 88 aa9.88□□□□□ -0.83
CTNS-201ENST00000046640 IGLL5B9A064 214 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 C12orf74Q32Q52 190 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 PHLDA3Q9Y5J5 127 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 ZNF469Q96JG9 3925 aaPredicted RBP9.87□□□□□ -0.83
CTNS-201ENST00000046640 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
CTNS-201ENST00000046640 OVOL1O14753 267 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 ETDBQ3ZM63 59 aa9.87□□□□□ -0.83
CTNS-201ENST00000046640 UBR5O95071 2799 aaPredicted RBP9.86□□□□□ -0.83
CTNS-201ENST00000046640 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 SYNJ2BPP57105 145 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 CFHR3Q02985 330 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 TSSC4Q9Y5U2 329 aaPredicted RBP9.86□□□□□ -0.83
CTNS-201ENST00000046640 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 H3BUA1 57 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 NF1P21359 2839 aa9.86□□□□□ -0.83
CTNS-201ENST00000046640 PSMB8P28062 276 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 PSMG4Q5JS54 123 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 CLUHP3Q96NS8 147 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 ATP6V0BQ99437 205 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 TRAV12-3A0A0B4J271 114 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 OR11H12B2RN74 326 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 ASIPP42127 132 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 OR11H1Q8NG94 326 aa9.85□□□□□ -0.83
CTNS-201ENST00000046640 OR11H2Q8NH07 326 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms