RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 C11orf21Q9P2W6 132 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 KRBOX1C9JBD0 128 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 HTN1P15515 57 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 AZU1P20160 251 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 MUC21Q5SSG8 566 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 RETNQ9HD89 108 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
LINC00339-213ENST00000642137 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 TMEM189A5PLL7 270 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 CBY3A6NI87 242 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 B4DEV8 164 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 GNRH2O43555 120 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 P01737 135 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 PRM2P04554 102 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 ERVFC1-1P60608 527 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 ADIRFQ15847 76 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 DNLZQ5SXM8 178 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 IBA57Q5T440 356 aaKnown RBP8.88□□□□□ -0.99
LINC00339-213ENST00000642137 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 TMEM263Q8WUH6 116 aaKnown RBP8.88□□□□□ -0.99
LINC00339-213ENST00000642137 C16orf74Q96GX8 76 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
LINC00339-213ENST00000642137 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 TP53TG3Q9ULZ0 132 aa8.88□□□□□ -0.99
LINC00339-213ENST00000642137 CARHSP1Q9Y2V2 147 aaKnown RBP8.88□□□□□ -0.99
LINC00339-213ENST00000642137 GATCO43716 136 aaKnown RBP8.87□□□□□ -0.99
LINC00339-213ENST00000642137 TYMSP04818 313 aa8.87□□□□□ -0.99
LINC00339-213ENST00000642137 CXCL1P09341 107 aa8.87□□□□□ -0.99
LINC00339-213ENST00000642137 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
LINC00339-213ENST00000642137 Q8NAQ8 132 aa8.87□□□□□ -0.99
LINC00339-213ENST00000642137 RNASE8Q8TDE3 154 aaKnown RBP8.87□□□□□ -0.99
LINC00339-213ENST00000642137 XKRY2A2RUG3 117 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 M0R036 132 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 C15orf54Q8N8G6 183 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 C11orf72Q8NBR9 251 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 OR2D3Q8NGH3 330 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
LINC00339-213ENST00000642137 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
LINC00339-213ENST00000642137 IGHV4-28A0A0C4DH34 117 aa8.85□□□□□ -0.99
LINC00339-213ENST00000642137 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
LINC00339-213ENST00000642137 RPL19P84098 196 aaKnown RBP8.85□□□□□ -0.99
LINC00339-213ENST00000642137 CT83Q5H943 113 aa8.85□□□□□ -0.99
LINC00339-213ENST00000642137 SPXQ9BT56 116 aa8.85□□□□□ -0.99
LINC00339-213ENST00000642137 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
LINC00339-213ENST00000642137 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
LINC00339-213ENST00000642137 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 GRIFINA4D1Z8 144 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 A8MWL6 223 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 SNURFLB1AK76 121 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 PPP1R2P9O14990 202 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
LINC00339-213ENST00000642137 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
LINC00339-213ENST00000642137 ASIPP42127 132 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 TCL1AP56279 114 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 ZNF415Q09FC8 603 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 DAZ2Q13117 558 aaKnown RBP8.84□□□□□ -0.99
LINC00339-213ENST00000642137 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 C11orf68Q9H3H3 251 aaKnown RBP8.84□□□□□ -0.99
LINC00339-213ENST00000642137 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 TIMM8BQ9Y5J9 83 aaPredicted RBP8.84□□□□□ -0.99
LINC00339-213ENST00000642137 V9GYV3 84 aa8.84□□□□□ -0.99
LINC00339-213ENST00000642137 MT-ND4LP03901 98 aa8.83□□□□□ -1
LINC00339-213ENST00000642137 MED14OSP0DP75 135 aa8.83□□□□□ -1
LINC00339-213ENST00000642137 FOXA3P55318 350 aaPredicted RBP8.83□□□□□ -1
LINC00339-213ENST00000642137 C9orf85Q96MD7 179 aa8.83□□□□□ -1
LINC00339-213ENST00000642137 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
LINC00339-213ENST00000642137 IL36BQ9NZH7 164 aa8.83□□□□□ -1
LINC00339-213ENST00000642137 A0A1W2PPQ1 181 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 FAM231BA6NCW3 169 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 LYRM9A8MSI8 78 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 APOC3P02656 99 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 RNF212Q495C1 297 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 CLRN3Q8NCR9 226 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 IL17DQ8TAD2 202 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 TSKUQ8WUA8 353 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 PTH2Q96A98 100 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 GFRA4Q9GZZ7 299 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 SCRT2Q9NQ03 307 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 U3KQK5 164 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
LINC00339-213ENST00000642137 A0A0J9YWU9 116 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 F2Z2F3 143 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 DEFB4AO15263 64 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 SNAI2O43623 268 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 SPINK4O60575 86 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 SNAPINO95295 136 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 OR5AL1P0C617 328 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 IGLC6P0CF74 106 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 SPART-AS1P0CW21 52 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 GZMBP10144 247 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 EMP1P54849 157 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 LGALS9BQ3B8N2 356 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 SVBPQ8N300 66 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 CTDSP1Q9GZU7 261 aa8.81□□□□□ -1
LINC00339-213ENST00000642137 NOP10Q9NPE3 64 aaKnown RBP8.81□□□□□ -1
LINC00339-213ENST00000642137 DKK2Q9UBU2 259 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms