RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
PHGDH-234ENST00000642041 FOXI2Q6ZQN5 318 aa12.87□□□□□ -0.35
PHGDH-234ENST00000642041 ZFP82Q8N141 532 aa12.87□□□□□ -0.35
PHGDH-234ENST00000642041 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
PHGDH-234ENST00000642041 APCSP02743 223 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 MED14OSP0DP75 135 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 HLA-DMBP28068 263 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 CRIP1P50238 77 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 RAB4BP61018 213 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-234ENST00000642041 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 RYR1P21817 5038 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 CSMD3Q7Z407 3707 aa12.86□□□□□ -0.35
PHGDH-234ENST00000642041 A0A1B0GXF2 115 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 A0A1W2PRX2 142 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 ORM1P02763 201 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 GPX1P07203 203 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 CSN3P07498 182 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 S100A2P29034 98 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 SLURP1P55000 103 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 NDUFA6P56556 154 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 SNRPEP62304 92 aaKnown RBP12.85□□□□□ -0.35
PHGDH-234ENST00000642041 CACNG7P62955 275 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 Q0VG73 95 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 TMEM136Q6ZRR5 245 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 FAM19A4Q96LR4 140 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
PHGDH-234ENST00000642041 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
PHGDH-234ENST00000642041 TCL1AP56279 114 aa12.84□□□□□ -0.35
PHGDH-234ENST00000642041 C18orf65Q6ZTR6 163 aa12.84□□□□□ -0.35
PHGDH-234ENST00000642041 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
PHGDH-234ENST00000642041 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-234ENST00000642041 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
PHGDH-234ENST00000642041 STARD9Q9P2P6 4700 aa12.84□□□□□ -0.35
PHGDH-234ENST00000642041 AMBPP02760 352 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 ERCC8Q13216 396 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 DEFB136Q30KP8 78 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 DEFB114Q30KQ6 69 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 MRPL54Q6P161 138 aaKnown RBP12.83□□□□□ -0.36
PHGDH-234ENST00000642041 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 GTSF1Q8WW33 167 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 PGLYRP4Q96LB8 373 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 C20orf173Q96LM9 149 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 CNFNQ9BYD5 112 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 GPR61Q9BZJ8 451 aa12.83□□□□□ -0.36
PHGDH-234ENST00000642041 CA1P00915 261 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-234ENST00000642041 PF4P02776 101 aa12.82□□□□□ -0.36
PHGDH-234ENST00000642041 CTRLP40313 264 aa12.82□□□□□ -0.36
PHGDH-234ENST00000642041 ZNF493Q6ZR52 646 aa12.82□□□□□ -0.36
PHGDH-234ENST00000642041 Q8TAT8 98 aa12.82□□□□□ -0.36
PHGDH-234ENST00000642041 RAX2Q96IS3 184 aa12.82□□□□□ -0.36
PHGDH-234ENST00000642041 PACRGQ96M98 296 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-234ENST00000642041 A0A0J9YX75 114 aa12.81□□□□□ -0.36
PHGDH-234ENST00000642041 OR5AL1P0C617 328 aa12.81□□□□□ -0.36
PHGDH-234ENST00000642041 INSL3P51460 131 aa12.81□□□□□ -0.36
PHGDH-234ENST00000642041 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
PHGDH-234ENST00000642041 WFDC3Q8IUB2 231 aa12.81□□□□□ -0.36
PHGDH-234ENST00000642041 KLLNB2CW77 178 aa12.8□□□□□ -0.36
PHGDH-234ENST00000642041 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
PHGDH-234ENST00000642041 TMEM18Q96B42 140 aa12.8□□□□□ -0.36
PHGDH-234ENST00000642041 C20orf144Q9BQM9 153 aa12.8□□□□□ -0.36
PHGDH-234ENST00000642041 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
PHGDH-234ENST00000642041 PPBPP02775 128 aa12.79□□□□□ -0.36
PHGDH-234ENST00000642041 CDKN1BP46527 198 aa12.79□□□□□ -0.36
PHGDH-234ENST00000642041 CAMPP49913 170 aa12.79□□□□□ -0.36
PHGDH-234ENST00000642041 ZFAND2AQ8N6M9 145 aa12.79□□□□□ -0.36
PHGDH-234ENST00000642041 SSBP4Q9BWG4 385 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-234ENST00000642041 IGHV4-4A0A075B6R2 117 aa12.78□□□□□ -0.36
PHGDH-234ENST00000642041 A8MTW9 85 aa12.78□□□□□ -0.36
PHGDH-234ENST00000642041 SPINK4O60575 86 aa12.78□□□□□ -0.36
PHGDH-234ENST00000642041 ZNF688P0C7X2 276 aa12.78□□□□□ -0.36
PHGDH-234ENST00000642041 ESDP10768 282 aa12.78□□□□□ -0.36
PHGDH-234ENST00000642041 ZNF80P51504 273 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-234ENST00000642041 DUX3Q96PT4 197 aa12.78□□□□□ -0.36
PHGDH-234ENST00000642041 TDRG1Q3Y452 100 aa12.77□□□□□ -0.37
PHGDH-234ENST00000642041 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
PHGDH-234ENST00000642041 FAM159AQ6UWV7 190 aa12.77□□□□□ -0.37
PHGDH-234ENST00000642041 BAGE3Q86Y29 109 aa12.77□□□□□ -0.37
PHGDH-234ENST00000642041 TMEM191AQ9H0A3 160 aa12.77□□□□□ -0.37
PHGDH-234ENST00000642041 ZMAT5Q9UDW3 170 aaKnown RBP12.77□□□□□ -0.37
PHGDH-234ENST00000642041 LAMTOR2Q9Y2Q5 125 aa12.77□□□□□ -0.37
PHGDH-234ENST00000642041 C7orf71A4D174 169 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 SNAI2O43623 268 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 HLA-DRB4P13762 266 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 RAB4AP20338 218 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 S100A4P26447 101 aaKnown RBP12.76□□□□□ -0.37
PHGDH-234ENST00000642041 ASIPP42127 132 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
PHGDH-234ENST00000642041 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 TMEM61Q8N0U2 210 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 HLA-DRB4X5D2U9 266 aa12.76□□□□□ -0.37
PHGDH-234ENST00000642041 PMCHP20382 165 aa12.75□□□□□ -0.37
PHGDH-234ENST00000642041 TFPI2P48307 235 aa12.75□□□□□ -0.37
PHGDH-234ENST00000642041 AKR1D1P51857 326 aa12.75□□□□□ -0.37
PHGDH-234ENST00000642041 MCRIP2Q9BUT9 160 aaKnown RBP12.75□□□□□ -0.37
PHGDH-234ENST00000642041 TWIST1Q15672 202 aa12.74□□□□□ -0.37
PHGDH-234ENST00000642041 HIST3H2BBQ8N257 126 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms