RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 FAM210BQ96KR6 192 aa18.76■□□□□ 0.59
VEGFA-231ENST00000640499 NDUFAF3Q9BU61 184 aa18.76■□□□□ 0.59
VEGFA-231ENST00000640499 NAGKQ9UJ70 344 aa18.76■□□□□ 0.59
VEGFA-231ENST00000640499 SAPCD1Q5SSQ6 148 aa18.75■□□□□ 0.59
VEGFA-231ENST00000640499 TCEAL7Q9BRU2 100 aa18.75■□□□□ 0.59
VEGFA-231ENST00000640499 F5H768 121 aa18.74■□□□□ 0.59
VEGFA-231ENST00000640499 HOXA5P20719 270 aa18.74■□□□□ 0.59
VEGFA-231ENST00000640499 SMUG1Q53HV7 270 aa18.74■□□□□ 0.59
VEGFA-231ENST00000640499 TRGV1A0A0A0MS02 117 aa18.73■□□□□ 0.59
VEGFA-231ENST00000640499 IGHV3-16A0A0C4DH30 117 aa18.73■□□□□ 0.59
VEGFA-231ENST00000640499 TYMSP04818 313 aa18.73■□□□□ 0.59
VEGFA-231ENST00000640499 C18orf15Q96N68 181 aa18.73■□□□□ 0.59
VEGFA-231ENST00000640499 MRPL16Q9NX20 251 aaKnown RBP18.73■□□□□ 0.59
VEGFA-231ENST00000640499 TRBV6-1A0A0K0K1D8 114 aa18.72■□□□□ 0.59
VEGFA-231ENST00000640499 PFN1P07737 140 aaKnown RBP18.72■□□□□ 0.59
VEGFA-231ENST00000640499 CRIP1P50238 77 aa18.72■□□□□ 0.59
VEGFA-231ENST00000640499 PPT1P50897 306 aa18.72■□□□□ 0.59
VEGFA-231ENST00000640499 ZNF415Q09FC8 603 aa18.72■□□□□ 0.59
VEGFA-231ENST00000640499 COX8CQ7Z4L0 72 aa18.72■□□□□ 0.59
VEGFA-231ENST00000640499 SCO2A0A1W2PP80 73 aa18.71■□□□□ 0.59
VEGFA-231ENST00000640499 FMC1Q96HJ9 113 aa18.71■□□□□ 0.59
VEGFA-231ENST00000640499 GNG13Q9P2W3 67 aa18.71■□□□□ 0.59
VEGFA-231ENST00000640499 TRGV11A0A075B6L2 103 aa18.7■□□□□ 0.58
VEGFA-231ENST00000640499 LGALS9BQ3B8N2 356 aa18.7■□□□□ 0.58
VEGFA-231ENST00000640499 ALKAL2Q6UX46 152 aa18.7■□□□□ 0.58
VEGFA-231ENST00000640499 ZC2HC1AQ96GY0 325 aa18.7■□□□□ 0.58
VEGFA-231ENST00000640499 LTAP01374 205 aa18.69■□□□□ 0.58
VEGFA-231ENST00000640499 ZFP30Q9Y2G7 519 aa18.69■□□□□ 0.58
VEGFA-231ENST00000640499 IGKV3D-20A0A0C4DH25 116 aa18.68■□□□□ 0.58
VEGFA-231ENST00000640499 AKR1C3P42330 323 aa18.68■□□□□ 0.58
VEGFA-231ENST00000640499 ZNF575Q86XF7 245 aa18.68■□□□□ 0.58
VEGFA-231ENST00000640499 SDF2L1Q9HCN8 221 aa18.68■□□□□ 0.58
VEGFA-231ENST00000640499 MANBALQ9NQG1 85 aa18.68■□□□□ 0.58
VEGFA-231ENST00000640499 MUC4Q99102 2169 aa18.68■□□□□ 0.58
VEGFA-231ENST00000640499 KCNS1Q96KK3 526 aa18.67■□□□□ 0.58
VEGFA-231ENST00000640499 TRGV2A0A075B6R0 118 aa18.66■□□□□ 0.58
VEGFA-231ENST00000640499 UBE2G1P62253 170 aa18.66■□□□□ 0.58
VEGFA-231ENST00000640499 RASL10AQ92737 203 aa18.66■□□□□ 0.58
VEGFA-231ENST00000640499 SPXQ9BT56 116 aa18.66■□□□□ 0.58
VEGFA-231ENST00000640499 FABP5P3A8MUU1 101 aa18.65■□□□□ 0.58
VEGFA-231ENST00000640499 OR5I1Q13606 314 aa18.65■□□□□ 0.58
VEGFA-231ENST00000640499 POM121L12Q8N7R1 296 aa18.64■□□□□ 0.57
VEGFA-231ENST00000640499 C11orf52Q96A22 123 aa18.64■□□□□ 0.57
VEGFA-231ENST00000640499 TRAV26-1A0A087WT03 109 aa18.63■□□□□ 0.57
VEGFA-231ENST00000640499 ZNF674Q2M3X9 581 aa18.63■□□□□ 0.57
VEGFA-231ENST00000640499 NHLRC2Q8NBF2 726 aa18.63■□□□□ 0.57
VEGFA-231ENST00000640499 VSIG2Q96IQ7 327 aa18.63■□□□□ 0.57
VEGFA-231ENST00000640499 MLST8Q9BVC4 326 aa18.63■□□□□ 0.57
VEGFA-231ENST00000640499 DNAH10Q8IVF4 4471 aa18.63■□□□□ 0.57
VEGFA-231ENST00000640499 TEX46H3BTG2 121 aa18.62■□□□□ 0.57
VEGFA-231ENST00000640499 SH2D1AO60880 128 aa18.62■□□□□ 0.57
VEGFA-231ENST00000640499 IGHV3-53P01767 116 aa18.62■□□□□ 0.57
VEGFA-231ENST00000640499 RNASE3P12724 160 aaKnown RBP18.62■□□□□ 0.57
VEGFA-231ENST00000640499 C15orf53Q8NAA6 179 aa18.62■□□□□ 0.57
VEGFA-231ENST00000640499 C9orf85Q96MD7 179 aa18.62■□□□□ 0.57
VEGFA-231ENST00000640499 DERL1Q9BUN8 251 aa18.62■□□□□ 0.57
VEGFA-231ENST00000640499 A0A0J9YY99 117 aa18.61■□□□□ 0.57
VEGFA-231ENST00000640499 M0R2P5 195 aa18.61■□□□□ 0.57
VEGFA-231ENST00000640499 S100A9P06702 114 aaKnown RBP18.61■□□□□ 0.57
VEGFA-231ENST00000640499 P0DMU3 169 aa18.61■□□□□ 0.57
VEGFA-231ENST00000640499 FAM231AP0DMU4 169 aa18.61■□□□□ 0.57
VEGFA-231ENST00000640499 FAM231CP0DMU5 169 aa18.61■□□□□ 0.57
VEGFA-231ENST00000640499 FHL2Q14192 279 aa18.6■□□□□ 0.57
VEGFA-231ENST00000640499 LYPD6BQ8NI32 183 aa18.6■□□□□ 0.57
VEGFA-231ENST00000640499 KRBOX1C9JBD0 128 aa18.59■□□□□ 0.57
VEGFA-231ENST00000640499 NUDT3O95989 172 aa18.59■□□□□ 0.57
VEGFA-231ENST00000640499 BCL2P10415 239 aa18.59■□□□□ 0.57
VEGFA-231ENST00000640499 RPL35P42766 123 aaKnown RBP18.59■□□□□ 0.57
VEGFA-231ENST00000640499 MEF2BQ02080 365 aaPredicted RBP18.59■□□□□ 0.57
VEGFA-231ENST00000640499 BAGE2Q86Y30 109 aa18.59■□□□□ 0.57
VEGFA-231ENST00000640499 ZNF479Q96JC4 524 aa18.59■□□□□ 0.57
VEGFA-231ENST00000640499 SFTA3P0C7M3 94 aa18.58■□□□□ 0.56
VEGFA-231ENST00000640499 FAM162BQ5T6X4 162 aa18.58■□□□□ 0.56
VEGFA-231ENST00000640499 TXNDC17Q9BRA2 123 aa18.58■□□□□ 0.56
VEGFA-231ENST00000640499 NACAE9PAV3 2078 aa18.58■□□□□ 0.56
VEGFA-231ENST00000640499 PGPEP1LA6NFU8 196 aa18.56■□□□□ 0.56
VEGFA-231ENST00000640499 H3BNG1 76 aa18.56■□□□□ 0.56
VEGFA-231ENST00000640499 M0R036 132 aa18.56■□□□□ 0.56
VEGFA-231ENST00000640499 ORM1P02763 201 aa18.56■□□□□ 0.56
VEGFA-231ENST00000640499 BLOC1S1P78537 153 aa18.56■□□□□ 0.56
VEGFA-231ENST00000640499 VAX2Q9UIW0 290 aa18.56■□□□□ 0.56
VEGFA-231ENST00000640499 EPPK1P58107 5090 aaKnown RBP18.56■□□□□ 0.56
VEGFA-231ENST00000640499 B4DEV8 164 aa18.55■□□□□ 0.56
VEGFA-231ENST00000640499 IFNA1P01562 189 aa18.55■□□□□ 0.56
VEGFA-231ENST00000640499 IGLV2-8P01709 118 aa18.55■□□□□ 0.56
VEGFA-231ENST00000640499 DNLZQ5SXM8 178 aa18.55■□□□□ 0.56
VEGFA-231ENST00000640499 DNAH2Q9P225 4427 aa18.54■□□□□ 0.56
VEGFA-231ENST00000640499 RAB19A4D1S5 217 aa18.54■□□□□ 0.56
VEGFA-231ENST00000640499 LINC01559Q495D7 138 aa18.54■□□□□ 0.56
VEGFA-231ENST00000640499 PTH2Q96A98 100 aa18.54■□□□□ 0.56
VEGFA-231ENST00000640499 TRAV4A0A0B4J268 109 aa18.53■□□□□ 0.56
VEGFA-231ENST00000640499 GRIFINA4D1Z8 144 aa18.53■□□□□ 0.56
VEGFA-231ENST00000640499 C9JCJ5 164 aa18.53■□□□□ 0.56
VEGFA-231ENST00000640499 CRYBA4P53673 196 aa18.53■□□□□ 0.56
VEGFA-231ENST00000640499 RNF212Q495C1 297 aa18.53■□□□□ 0.56
VEGFA-231ENST00000640499 ZNF876PQ49A33 203 aa18.53■□□□□ 0.56
VEGFA-231ENST00000640499 PDE6DO43924 150 aa18.52■□□□□ 0.56
VEGFA-231ENST00000640499 HHLA3Q9XRX5 114 aa18.52■□□□□ 0.56
VEGFA-231ENST00000640499 TRBV20OR9-2A0A075B6H5 130 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 A0A096LPF7 62 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms