RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 LSM4Q9Y4Z0 139 aaKnown RBP4.51□□□□□ -1.69
RTTN-218ENST00000640408 RNF114Q9Y508 228 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 FGF6P10767 208 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
RTTN-218ENST00000640408 HIST2H2BCQ6DN03 193 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 H3BTX0 84 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 H3BUX3 64 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 LINC01545Q5VT33 79 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 SCRT1Q9BWW7 348 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 SIRPDQ9H106 197 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 IGKV1D-13A0A0B4J2D9 117 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 NUPR1O60356 82 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 IGKV1-13P0DP09 117 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 SRSF2Q01130 221 aaKnown RBP4.51□□□□□ -1.69
RTTN-218ENST00000640408 EBLN2Q6P2I7 272 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 CENPVQ7Z7K6 275 aaPredicted RBP4.51□□□□□ -1.69
RTTN-218ENST00000640408 GLMPQ8WWB7 406 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 CDH23Q9H251 3354 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 IGHV3-21A0A0B4J1V1 117 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 ZNF138P52744 262 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 FGF23Q9GZV9 251 aaPredicted RBP4.51□□□□□ -1.69
RTTN-218ENST00000640408 VPREB3Q9UKI3 123 aa4.51□□□□□ -1.69
RTTN-218ENST00000640408 IGKV1D-8A0A087WSZ0 117 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 TCRBV4S1A1TA0A5B7 111 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 TIMM23O14925 209 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 C16orf92Q96LL3 132 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 PKIGQ9Y2B9 76 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 C15orf61A6NNL5 157 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 SPATA31B1PQ5VZV4 182 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 C5orf24Q7Z6I8 188 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 ZNF329Q86UD4 541 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 IGHV1-3A0A0C4DH29 117 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
RTTN-218ENST00000640408 METTL26Q96S19 204 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 PEMTQ9UBM1 199 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 NDUFA7O95182 113 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 IGKV1D-33P01593 117 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 IGKV1-33P01594 117 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 CRPP02741 224 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 C11orf52Q96A22 123 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 C1orf159Q96HA4 380 aa4.5□□□□□ -1.69
RTTN-218ENST00000640408 A0A1B0GX51 115 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 CGB3P0DN86 165 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 CGB7P0DN87 165 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 HERVK_113P63121 156 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 LYZL1Q6UWQ5 148 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 C3orf56Q8N813 242 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 MAPK1IP1LQ8NDC0 245 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 ZNF747Q9BV97 191 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 C15orf65H3BRN8 121 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 PYYP10082 97 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 DUTP33316 252 aaKnown RBP4.49□□□□□ -1.69
RTTN-218ENST00000640408 IL15RAQ13261 267 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 LY6EQ16553 131 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 C17orf58Q2M2W7 97 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 Q8N8P6 123 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 AJUBAQ96IF1 538 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 LINC00479Q96M42 142 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 UBL5Q9BZL1 73 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 IGHV3OR16-10A0A075B7F0 116 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 CRLF1O75462 422 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 LY6G6DO95868 133 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 C9orf139Q6ZV77 190 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 CENPVL3A0A0U1RRI6 287 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 NCR2O95944 276 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 IGLV1-47P01700 117 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 TCRAP04437 139 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 SAA2P0DJI9 122 aaPredicted RBP4.49□□□□□ -1.69
RTTN-218ENST00000640408 BRD3OSQ6XYD6 125 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 YPEL4Q96NS1 127 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 CHCHD5Q9BSY4 110 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 HCFC1P51610 2035 aa4.49□□□□□ -1.69
RTTN-218ENST00000640408 HCP5Q6MZN7 132 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 Q71RC1 249 aaPredicted RBP4.48□□□□□ -1.69
RTTN-218ENST00000640408 CENPEQ02224 2701 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 UNC80Q8N2C7 3258 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 FXYD7P58549 80 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
RTTN-218ENST00000640408 MGAQ8IWI9 3026 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 M0R381 172 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 CFC1BP0CG36 223 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 CFC1P0CG37 223 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 ZFP36P26651 326 aaKnown RBP4.48□□□□□ -1.69
RTTN-218ENST00000640408 TMEM167AQ8TBQ9 72 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 C20orf78Q9BR46 151 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 ZNRD1Q9P1U0 126 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 LINC00527Q9UJ94 153 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 TMEM89A2RUT3 159 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 LEPROTO15243 131 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 ELANEP08246 267 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 CTRLP40313 264 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
RTTN-218ENST00000640408 PRSS46E5RG02 174 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 HLA-DRB4P13762 266 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 CD69Q07108 199 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 DEFB112Q30KQ8 113 aa4.48□□□□□ -1.69
RTTN-218ENST00000640408 FAM104BQ5XKR9 115 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms