RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 EFNA4P52798 201 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 ZNF837Q96EG3 531 aaPredicted RBP10.56□□□□□ -0.72
UBE3A-228ENST00000638155 UNQ6494/PRO21346Q6UXR6 183 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 TEN1Q86WV5 123 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 BRD3OSQ6XYD6 125 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 TMEM178BH3BS89 294 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 ZFP36L1Q07352 338 aaKnown RBP10.55□□□□□ -0.72
UBE3A-228ENST00000638155 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
UBE3A-228ENST00000638155 KIR2DL5BA0A0G2JN68 375 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 KIR2DL5BA0A0G2JPC4 375 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 KIR2DL5AQ8N109 375 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 FAM110DQ8TAY7 271 aaPredicted RBP10.55□□□□□ -0.72
UBE3A-228ENST00000638155 PYGO2Q9BRQ0 406 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 SRRM5B3KS81 715 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 TIAF1O95411 115 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 DENND4CQ5VZ89 1909 aa10.55□□□□□ -0.72
UBE3A-228ENST00000638155 DSCAMO60469 2012 aa10.54□□□□□ -0.72
UBE3A-228ENST00000638155 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
UBE3A-228ENST00000638155 ZNF672Q499Z4 452 aaPredicted RBP10.54□□□□□ -0.72
UBE3A-228ENST00000638155 IGKV1-9A0A0C4DH69 117 aa10.54□□□□□ -0.72
UBE3A-228ENST00000638155 SEM1Q6ZVN7 128 aa10.54□□□□□ -0.72
UBE3A-228ENST00000638155 A0A096LPF7 62 aa10.54□□□□□ -0.72
UBE3A-228ENST00000638155 C15orf62A8K5M9 175 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 NDUFS7O75251 213 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 GATA3P23771 443 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 IGKV1D-8A0A087WSZ0 117 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 IL15RAQ13261 267 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 Q6ZVH6 145 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 UPK3BQ9BT76 320 aa10.53□□□□□ -0.72
UBE3A-228ENST00000638155 Q9HAA7 133 aa10.52□□□□□ -0.72
UBE3A-228ENST00000638155 SND1-IT1Q9HBX3 110 aa10.52□□□□□ -0.72
UBE3A-228ENST00000638155 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 FOXF2Q12947 444 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 CSRP1P21291 193 aaKnown RBP10.52□□□□□ -0.73
UBE3A-228ENST00000638155 CAMK2N2Q96S95 79 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 A0A0G2JMZ2 1700 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 LRRC37A2A6NM11 1700 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 LRRC37AA6NMS7 1700 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 SAA4P35542 130 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 LAIR2Q6ISS4 152 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 SH2D6Q7Z4S9 175 aa10.52□□□□□ -0.73
UBE3A-228ENST00000638155 GNLYP22749 145 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 MST1LQ2TV78 715 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 PDE6GP18545 87 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 MBD3L4A6NDZ8 208 aaPredicted RBP10.51□□□□□ -0.73
UBE3A-228ENST00000638155 MBD3L3A6NE82 208 aaPredicted RBP10.51□□□□□ -0.73
UBE3A-228ENST00000638155 MBD3L5A6NJ08 208 aaPredicted RBP10.51□□□□□ -0.73
UBE3A-228ENST00000638155 MBD3L2Q8NHZ7 208 aaPredicted RBP10.51□□□□□ -0.73
UBE3A-228ENST00000638155 CSPG4Q6UVK1 2322 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 ATP5EP56381 51 aaPredicted RBP10.51□□□□□ -0.73
UBE3A-228ENST00000638155 HIST2H2BCQ6DN03 193 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 LINC00114Q6XXX2 140 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 A6NED7 52 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 LINC00473A8K010 186 aa10.51□□□□□ -0.73
UBE3A-228ENST00000638155 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
UBE3A-228ENST00000638155 EFNA2O43921 213 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 KIF26AQ9ULI4 1882 aaPredicted RBP10.5□□□□□ -0.73
UBE3A-228ENST00000638155 HOXB4P17483 251 aaPredicted RBP10.5□□□□□ -0.73
UBE3A-228ENST00000638155 Q6ZQT7 251 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 FAM236DA0A1B0GTK5 79 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 LGALS9O00182 355 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 FAM236CP0DP71 79 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 NLRC5Q86WI3 1866 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 CYYR1Q96J86 154 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 PAQR4Q8N4S7 273 aaPredicted RBP10.5□□□□□ -0.73
UBE3A-228ENST00000638155 Q6ZUT4 128 aa10.5□□□□□ -0.73
UBE3A-228ENST00000638155 MLST8Q9BVC4 326 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
UBE3A-228ENST00000638155 COX7A2LO14548 114 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 CD177Q8N6Q3 437 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 TMEM14BQ9NUH8 114 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 TRBV10-2A0A0K0K1G8 114 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 ADAMTS9Q9P2N4 1935 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 OTOGLQ3ZCN5 2332 aa10.49□□□□□ -0.73
UBE3A-228ENST00000638155 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 SPRR3Q9UBC9 169 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
UBE3A-228ENST00000638155 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
UBE3A-228ENST00000638155 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
UBE3A-228ENST00000638155 V9GYV3 84 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 ZC2HC1AQ96GY0 325 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 PRR25Q96S07 402 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 TGFBR3LH3BV60 316 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
UBE3A-228ENST00000638155 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
UBE3A-228ENST00000638155 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
UBE3A-228ENST00000638155 WIPF3A6NGB9 483 aa10.47□□□□□ -0.73
UBE3A-228ENST00000638155 EIF4EBP2Q13542 120 aaPredicted RBP10.47□□□□□ -0.73
UBE3A-228ENST00000638155 TMEM14CQ9P0S9 112 aa10.47□□□□□ -0.73
UBE3A-228ENST00000638155 J3QKU1 62 aa10.47□□□□□ -0.73
UBE3A-228ENST00000638155 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
UBE3A-228ENST00000638155 TRBV6-6A0A0A6YYG2 114 aa10.47□□□□□ -0.73
UBE3A-228ENST00000638155 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms