RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
CLN6-223ENST00000637823 TRAV12-2A0A075B6T6 113 aa8.65□□□□□ -1.02
CLN6-223ENST00000637823 TYMSP04818 313 aa8.65□□□□□ -1.02
CLN6-223ENST00000637823 FXYD7P58549 80 aa8.65□□□□□ -1.02
CLN6-223ENST00000637823 FAM159AQ6UWV7 190 aa8.65□□□□□ -1.02
CLN6-223ENST00000637823 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
CLN6-223ENST00000637823 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
CLN6-223ENST00000637823 GRIFINA4D1Z8 144 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 CRXO43186 299 aaPredicted RBP8.64□□□□□ -1.03
CLN6-223ENST00000637823 IGLC6P0CF74 106 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 KRTAP21-3Q3LHN1 58 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 TDRG1Q3Y452 100 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 COX19Q49B96 90 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 DNLZQ5SXM8 178 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 MORN3Q6PF18 240 aaPredicted RBP8.64□□□□□ -1.03
CLN6-223ENST00000637823 LYZL1Q6UWQ5 148 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 Q8N1Y9 231 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 FER1L6-AS1Q8NA97 138 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 WFDC10AQ9H1F0 79 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 SRD5A3Q9H8P0 318 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 NAGKQ9UJ70 344 aa8.64□□□□□ -1.03
CLN6-223ENST00000637823 F2Z2F3 143 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 INSP01308 110 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 RPS10P46783 165 aaKnown RBP8.63□□□□□ -1.03
CLN6-223ENST00000637823 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 MUC21Q5SSG8 566 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 ATP5L2Q7Z4Y8 100 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 PKD1L1Q8TDX9 2849 aa8.63□□□□□ -1.03
CLN6-223ENST00000637823 IGHV1OR15-1A0A075B7D0 117 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 GNRH2O43555 120 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 SPINK4O60575 86 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
CLN6-223ENST00000637823 CTRLP40313 264 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 ASIPP42127 132 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 EGFEM1PQ0D2K5 195 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 RIGQ13278 110 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 LINC00467Q9BRT7 94 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 SSBP4Q9BWG4 385 aaPredicted RBP8.62□□□□□ -1.03
CLN6-223ENST00000637823 C1QTNF4Q9BXJ3 329 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 XCL2Q9UBD3 114 aa8.62□□□□□ -1.03
CLN6-223ENST00000637823 A0A1B0GW15 77 aa8.61□□□□□ -1.03
CLN6-223ENST00000637823 S100A8P05109 93 aa8.61□□□□□ -1.03
CLN6-223ENST00000637823 OR5AL1P0C617 328 aa8.61□□□□□ -1.03
CLN6-223ENST00000637823 MRPL54Q6P161 138 aaKnown RBP8.61□□□□□ -1.03
CLN6-223ENST00000637823 TMEM256Q8N2U0 113 aa8.61□□□□□ -1.03
CLN6-223ENST00000637823 TPPP3Q9BW30 176 aa8.61□□□□□ -1.03
CLN6-223ENST00000637823 GNB1LQ9BYB4 327 aa8.61□□□□□ -1.03
CLN6-223ENST00000637823 TRRAPQ9Y4A5 3859 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 SNAI2O43623 268 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 GIG44P09565 113 aaPredicted RBP8.6□□□□□ -1.03
CLN6-223ENST00000637823 ARMS2P0C7Q2 107 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
CLN6-223ENST00000637823 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
CLN6-223ENST00000637823 HBBP68871 147 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 RBMY1FQ15415 496 aaKnown RBP8.6□□□□□ -1.03
CLN6-223ENST00000637823 LINC01587Q99440 93 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 CNFNQ9BYD5 112 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 CSTL1Q9H114 145 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 MUC4Q99102 2169 aa8.6□□□□□ -1.03
CLN6-223ENST00000637823 TRGV11A0A075B6L2 103 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 C1orf196B1AJZ1 125 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 MT-ND6P03923 174 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 FRMD6-AS1P0C7T7 363 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 CAMPP49913 170 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 CACNG7P62955 275 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 SCRT2Q9NQ03 307 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 GOLT1BQ9Y3E0 138 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 TRAPPC1Q9Y5R8 145 aa8.59□□□□□ -1.03
CLN6-223ENST00000637823 CMYA5Q8N3K9 4069 aa8.59□□□□□ -1.04
CLN6-223ENST00000637823 IGHV4-4A0A075B6R2 117 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 LOC102724200A0A096LPH7 203 aaPredicted RBP8.58□□□□□ -1.04
CLN6-223ENST00000637823 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 KIR2DL5BA0A0G2JN68 375 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 KIR2DL5BA0A0G2JPC4 375 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 CBY3A6NI87 242 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 H3BVH4 76 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 HLA-DQA1P01909 254 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 TRGC2P03986 189 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
CLN6-223ENST00000637823 NTF3P20783 257 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 RAB4BP61018 213 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 SAMD5Q5TGI4 173 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 KIR2DL5AQ8N109 375 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 TMEM208Q9BTX3 173 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
CLN6-223ENST00000637823 MUC21A0A0G2JKD1 596 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 MUC21A0A140T8X8 626 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms