RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 ATP5SQ99766 215 aa11.99□□□□□ -0.49
CIITA-215ENST00000637439 OR5AC2Q9NZP5 309 aa11.99□□□□□ -0.49
CIITA-215ENST00000637439 FLG2Q5D862 2391 aaPredicted RBP11.99□□□□□ -0.49
CIITA-215ENST00000637439 LOC100131303A0A0U1RQF7 123 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 GNRH2O43555 120 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
CIITA-215ENST00000637439 LRRC37A5PQ49AS3 106 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 Q8N814 137 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 KCNS1Q96KK3 526 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 HYLS1Q96M11 299 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 SDF2L1Q9HCN8 221 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 OTORQ9NRC9 128 aa11.98□□□□□ -0.49
CIITA-215ENST00000637439 CIDEAO60543 219 aa11.97□□□□□ -0.49
CIITA-215ENST00000637439 FFAR4Q5NUL3 377 aa11.97□□□□□ -0.49
CIITA-215ENST00000637439 PGPA6NDG6 321 aa11.96□□□□□ -0.49
CIITA-215ENST00000637439 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.49
CIITA-215ENST00000637439 SIX6O95475 246 aa11.96□□□□□ -0.49
CIITA-215ENST00000637439 C1QBP02746 253 aa11.96□□□□□ -0.49
CIITA-215ENST00000637439 HAMPP81172 84 aa11.96□□□□□ -0.49
CIITA-215ENST00000637439 OR10J3Q5JRS4 329 aa11.96□□□□□ -0.49
CIITA-215ENST00000637439 PRADC1Q9BSG0 188 aa11.96□□□□□ -0.49
CIITA-215ENST00000637439 H0YIZ8 118 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 TYMSP04818 313 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 Q9HAA7 133 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 TREM1Q9NP99 234 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 MBD2Q9UBB5 411 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 RPH3ALQ9UNE2 315 aa11.95□□□□□ -0.5
CIITA-215ENST00000637439 TRBV6-4A0A1B0GX49 114 aa11.94□□□□□ -0.5
CIITA-215ENST00000637439 ASAH1Q13510 395 aa11.94□□□□□ -0.5
CIITA-215ENST00000637439 RHOHQ15669 191 aa11.94□□□□□ -0.5
CIITA-215ENST00000637439 GOLT1AQ6ZVE7 132 aa11.94□□□□□ -0.5
CIITA-215ENST00000637439 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
CIITA-215ENST00000637439 ASB13Q8WXK3 278 aa11.94□□□□□ -0.5
CIITA-215ENST00000637439 J3QL48 77 aa11.93□□□□□ -0.5
CIITA-215ENST00000637439 LAGE3Q14657 143 aa11.93□□□□□ -0.5
CIITA-215ENST00000637439 ZNF876PQ49A33 203 aa11.93□□□□□ -0.5
CIITA-215ENST00000637439 LELP1Q5T871 98 aa11.93□□□□□ -0.5
CIITA-215ENST00000637439 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
CIITA-215ENST00000637439 TM2D2Q9BX73 214 aa11.93□□□□□ -0.5
CIITA-215ENST00000637439 F6UZH7 168 aa11.92□□□□□ -0.5
CIITA-215ENST00000637439 PET100P0DJ07 73 aa11.92□□□□□ -0.5
CIITA-215ENST00000637439 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
CIITA-215ENST00000637439 NDFIP1Q9BT67 221 aa11.92□□□□□ -0.5
CIITA-215ENST00000637439 SH3BGRL3Q9H299 93 aa11.92□□□□□ -0.5
CIITA-215ENST00000637439 HSPB11Q9Y547 144 aa11.92□□□□□ -0.5
CIITA-215ENST00000637439 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 RS1O15537 224 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 PLA2G1BP04054 148 aaKnown RBP11.91□□□□□ -0.5
CIITA-215ENST00000637439 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 LINC00299Q6ZSB3 139 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 GTSF1LQ9H1H1 148 aa11.91□□□□□ -0.5
CIITA-215ENST00000637439 DNAH8Q96JB1 4490 aa11.9□□□□□ -0.5
CIITA-215ENST00000637439 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
CIITA-215ENST00000637439 SERTM2A0A1B0GWG4 89 aa11.9□□□□□ -0.5
CIITA-215ENST00000637439 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
CIITA-215ENST00000637439 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
CIITA-215ENST00000637439 TAAR5O14804 337 aa11.89□□□□□ -0.51
CIITA-215ENST00000637439 MGST1P10620 155 aaKnown RBP11.89□□□□□ -0.51
CIITA-215ENST00000637439 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
CIITA-215ENST00000637439 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
CIITA-215ENST00000637439 S100ZQ8WXG8 99 aa11.89□□□□□ -0.51
CIITA-215ENST00000637439 PTH2Q96A98 100 aa11.89□□□□□ -0.51
CIITA-215ENST00000637439 MPC2O95563 127 aa11.88□□□□□ -0.51
CIITA-215ENST00000637439 H2BFSP57053 126 aa11.88□□□□□ -0.51
CIITA-215ENST00000637439 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
CIITA-215ENST00000637439 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
CIITA-215ENST00000637439 K7EQM0 130 aa11.87□□□□□ -0.51
CIITA-215ENST00000637439 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
CIITA-215ENST00000637439 IGHV3-73A0A0B4J1V6 119 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 INMT-MINDY4F8WBC2 141 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 GNG5P63218 68 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 TOR2AQ5JU69 321 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 Q6ZSA8 131 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 C9orf85Q96MD7 179 aa11.86□□□□□ -0.51
CIITA-215ENST00000637439 ZFP69Q49AA0 526 aa11.85□□□□□ -0.51
CIITA-215ENST00000637439 ZNF506Q5JVG8 444 aa11.85□□□□□ -0.51
CIITA-215ENST00000637439 C5orf17Q8NAS9 161 aa11.85□□□□□ -0.51
CIITA-215ENST00000637439 OR10G9Q8NGN4 311 aa11.85□□□□□ -0.51
CIITA-215ENST00000637439 OR10G7Q8NGN6 311 aa11.85□□□□□ -0.51
CIITA-215ENST00000637439 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
CIITA-215ENST00000637439 PGPEP1LA6NFU8 196 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
CIITA-215ENST00000637439 GCGP01275 180 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 TCRAP04437 139 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 ZNF80P51504 273 aaPredicted RBP11.84□□□□□ -0.51
CIITA-215ENST00000637439 RAB2AP61019 212 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
CIITA-215ENST00000637439 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms