RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 HIST1H2BDP58876 126 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST1H2BCP62807 126 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST2H2BEQ16778 126 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST1H2BHQ93079 126 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST1H2BNQ99877 126 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST1H2BMQ99879 126 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 MP68P56378 58 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
CACNA1A-240ENST00000637432 IGLV2-18A0A075B6J9 118 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 IFITM1P13164 125 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 CT83Q5H943 113 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 MRPL23Q16540 153 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 IGKV1D-8A0A087WSZ0 117 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 LY6G6CO95867 125 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 LRRC37AA6NMS7 1700 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 TANC1Q9C0D5 1861 aa12.94□□□□□ -0.34
CACNA1A-240ENST00000637432 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 RNF126Q9BV68 326 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 IGKV1-9A0A0C4DH69 117 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 IGHV4-31P0DP07 118 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 J3QLI3 93 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 DLEU1O43261 78 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 IGFBP3P17936 291 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 A0A087WZ39 114 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 RNF144BQ7Z419 303 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 HIST1H2BLQ99880 126 aa12.93□□□□□ -0.34
CACNA1A-240ENST00000637432 Q9H8V8 135 aa12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 A0A1B0GTI1 187 aa12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 WISP1O95388 367 aa12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 NREPQ16612 68 aa12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 SONP18583 2426 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 NDUFS7O75251 213 aa12.92□□□□□ -0.34
CACNA1A-240ENST00000637432 CRYGSP22914 178 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 KLK12Q9UKR0 248 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 Q8NFD4 153 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 IGKV3D-7A0A0C4DH55 119 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 BAALC-AS2P0C853 105 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 LAIR2Q6ISS4 152 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 SPANXDQ9BXN6 97 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 NPSP0C0P6 89 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 UBE2D3P61077 147 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 HERV-K104P63124 156 aa12.91□□□□□ -0.34
CACNA1A-240ENST00000637432 K7ERJ3 54 aa12.9□□□□□ -0.34
CACNA1A-240ENST00000637432 HIGD2BQ4VC39 106 aa12.9□□□□□ -0.34
CACNA1A-240ENST00000637432 CXCL1P09341 107 aa12.9□□□□□ -0.34
CACNA1A-240ENST00000637432 PCNX3Q9H6A9 2034 aa12.9□□□□□ -0.34
CACNA1A-240ENST00000637432 NUP210LQ5VU65 1888 aa12.9□□□□□ -0.34
CACNA1A-240ENST00000637432 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.35
CACNA1A-240ENST00000637432 WIPF3A6NGB9 483 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 K7ERS5 55 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 ATP6V0E2Q8NHE4 81 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 TMEM75Q8N9X5 138 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 IGKV1-12A0A0C4DH73 117 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 PRR20EP86478 221 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 PRR20CP86479 221 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 PRR20DP86480 221 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 PRR20BP86481 221 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 PRR20AP86496 221 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 ATRAIDQ6UW56 229 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 PRSS33Q8NF86 280 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 NCOR1P1Q9H4R4 102 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 FBLN5Q9UBX5 448 aa12.89□□□□□ -0.35
CACNA1A-240ENST00000637432 NTN3O00634 580 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 LTAP01374 205 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 UTF1Q5T230 341 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 NDUFA4O00483 81 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 RNF5Q99942 180 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 MRPL27Q9P0M9 148 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 Q86TA4 180 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 FAM110AQ9BQ89 295 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 ZNF581Q9P0T4 197 aa12.88□□□□□ -0.35
CACNA1A-240ENST00000637432 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 FOXI1Q12951 378 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 X6R8D5 127 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 HIGD2AQ9BW72 106 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 C1orf194Q5T5A4 169 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 PCP2Q8IVA1 136 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 MUSTN1Q8IVN3 82 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 DAND5Q8N907 189 aa12.87□□□□□ -0.35
CACNA1A-240ENST00000637432 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms