RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
CACNA1A-235ENST00000637004 CLEC3BP05452 202 aa12.03□□□□□ -0.48
CACNA1A-235ENST00000637004 GATA3P23771 443 aa12.03□□□□□ -0.48
CACNA1A-235ENST00000637004 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
CACNA1A-235ENST00000637004 DYNAPQ8N1N2 210 aa12.03□□□□□ -0.48
CACNA1A-235ENST00000637004 RBAKDNA6NC62 111 aa12.02□□□□□ -0.48
CACNA1A-235ENST00000637004 IGFBPL1Q8WX77 278 aa12.02□□□□□ -0.48
CACNA1A-235ENST00000637004 ERCC8Q13216 396 aa12.02□□□□□ -0.49
CACNA1A-235ENST00000637004 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
CACNA1A-235ENST00000637004 NPBQ8NG41 125 aa12.02□□□□□ -0.49
CACNA1A-235ENST00000637004 HELZ2Q9BYK8 2649 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-235ENST00000637004 AGRNO00468 2067 aa12.02□□□□□ -0.49
CACNA1A-235ENST00000637004 UTP20O75691 2785 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 TRGV3P03979 118 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 EFNA4P52798 201 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 CFHR4Q92496 578 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 UFC1Q9Y3C8 167 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 SPTBN1Q01082 2364 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 IGKV3D-20A0A0C4DH25 116 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 LYRM7Q5U5X0 104 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 CDIP1Q9H305 208 aa12.01□□□□□ -0.49
CACNA1A-235ENST00000637004 VCX2Q9H322 139 aa12□□□□□ -0.49
CACNA1A-235ENST00000637004 ROS1P08922 2347 aa12□□□□□ -0.49
CACNA1A-235ENST00000637004 LRRK2Q5S007 2527 aa12□□□□□ -0.49
CACNA1A-235ENST00000637004 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
CACNA1A-235ENST00000637004 IGFL3Q6UXB1 125 aa12□□□□□ -0.49
CACNA1A-235ENST00000637004 DPM3Q9P2X0 92 aa12□□□□□ -0.49
CACNA1A-235ENST00000637004 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 LGALS1P09382 135 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 SCGB3A1Q96QR1 104 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 POLEQ07864 2286 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 CTSGP08311 255 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 TMEM78Q5T7P6 136 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 OR11H6Q8NGC7 330 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 SMIM2Q9BVW6 85 aa11.99□□□□□ -0.49
CACNA1A-235ENST00000637004 IGHV4-4A0A075B6R2 117 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 PRAC2D3DTV9 90 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 SLC25A16P16260 332 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 SPANXN1Q5VSR9 72 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 SLC50A1Q9BRV3 221 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 HES1Q14469 280 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 Q8NA96 180 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 CENPEQ02224 2701 aa11.98□□□□□ -0.49
CACNA1A-235ENST00000637004 LINC01549A6NIU2 74 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 ONECUT1Q9UBC0 465 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 PSMB2P49721 201 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 SCGB1D4Q6XE38 83 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 NFE4Q86UQ8 179 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
CACNA1A-235ENST00000637004 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 UBE2D1P51668 147 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 Q6ZUT4 128 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 A0A0G2JNJ9 132 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 PRADC1Q9BSG0 188 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 Q9UFV3 132 aa11.96□□□□□ -0.49
CACNA1A-235ENST00000637004 MT-ATP8P03928 68 aa11.96□□□□□ -0.5
CACNA1A-235ENST00000637004 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.5
CACNA1A-235ENST00000637004 E7EQL1 145 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 TEN1Q86WV5 123 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 UBE2D3P61077 147 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 UBE2D2P62837 147 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 PKDREJQ9NTG1 2253 aa11.95□□□□□ -0.5
CACNA1A-235ENST00000637004 KLK15Q9H2R5 256 aa11.94□□□□□ -0.5
CACNA1A-235ENST00000637004 GCN1Q92616 2671 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-235ENST00000637004 IGHV3OR16-8A0A075B7F1 116 aa11.94□□□□□ -0.5
CACNA1A-235ENST00000637004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
CACNA1A-235ENST00000637004 TRBV20-1A0A075B6N2 111 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 BUB3O43684 328 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 XGP55808 180 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 VKORC1Q9BQB6 163 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 B9A039 149 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 NDPQ00604 133 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 RNF183Q96D59 192 aa11.93□□□□□ -0.5
CACNA1A-235ENST00000637004 ZFP2Q6ZN57 461 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 IGHV3-35A0A0C4DH35 117 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 GLMPQ8WWB7 406 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 TENM4Q6N022 2769 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 FHL3Q13643 280 aa11.92□□□□□ -0.5
CACNA1A-235ENST00000637004 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms