RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 BLCAPP62952 87 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 Q6ZS46 218 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 PRRC2AP48634 2157 aaKnown RBP8.91□□□□□ -0.98
CLN6-217ENST00000636964 C9orf118A6NHY6 69 aa8.91□□□□□ -0.98
CLN6-217ENST00000636964 CTSGP08311 255 aa8.91□□□□□ -0.98
CLN6-217ENST00000636964 DEFB113Q30KQ7 82 aa8.91□□□□□ -0.98
CLN6-217ENST00000636964 LINC00322Q6ZN03 302 aaPredicted RBP8.91□□□□□ -0.98
CLN6-217ENST00000636964 TIMM8BQ9Y5J9 83 aaPredicted RBP8.91□□□□□ -0.98
CLN6-217ENST00000636964 TEX15Q9BXT5 2789 aa8.91□□□□□ -0.98
CLN6-217ENST00000636964 LEPROTL1O95214 131 aa8.91□□□□□ -0.98
CLN6-217ENST00000636964 KMT2BQ9UMN6 2715 aaPredicted RBP8.9□□□□□ -0.98
CLN6-217ENST00000636964 COX8AP10176 69 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 EMP1P54849 157 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 EXOC3-AS1Q8N2X6 119 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 OR13C6PQ8NH95 151 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 PEX7O00628 323 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 CLEC19AQ6UXS0 136 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 KIR2DL5BQ8NHK3 375 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 DNAJC30Q96LL9 226 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 SHANK2-AS3Q9BTD1 123 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 Q9H3A6 140 aa8.9□□□□□ -0.98
CLN6-217ENST00000636964 HELZ2Q9BYK8 2649 aaKnown RBP8.9□□□□□ -0.98
CLN6-217ENST00000636964 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 WI2-2373I1.2A0A1W2PRP0 233 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 J3QLI3 93 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 TMEM97Q5BJF2 176 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.99
CLN6-217ENST00000636964 GTSF1Q8WW33 167 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 HECTD1Q9ULT8 2610 aa8.9□□□□□ -0.99
CLN6-217ENST00000636964 TRAV41A0A0B4J266 112 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 A6NDN8 102 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 PPIFP30405 207 aaKnown RBP8.89□□□□□ -0.99
CLN6-217ENST00000636964 MYCNOSP40205 109 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 DEFB112Q30KQ8 113 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 MEIG1Q5JSS6 88 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 TMEM78Q5T7P6 136 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 Q96MF0 132 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 EPDR1Q9UM22 224 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 H3BRN7 92 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 RS1O15537 224 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 Q71RC1 249 aaPredicted RBP8.89□□□□□ -0.99
CLN6-217ENST00000636964 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
CLN6-217ENST00000636964 A6NDX4 124 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 ZNF502Q8TBZ5 544 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 TMEM191AQ9H0A3 160 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 RABAC1Q9UI14 185 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 IGHV4-59P01825 116 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 FABP2P12104 132 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 BPIFA4PQ86YQ2 179 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 RAB37Q96AX2 223 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 CCDC140Q96MF4 163 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 NHLRC4P0CG21 123 aaPredicted RBP8.88□□□□□ -0.99
CLN6-217ENST00000636964 IGHV4-31P0DP07 118 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 PLA2G2AP14555 144 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 LCNL1Q6ZST4 164 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 CR1P17927 2039 aa8.88□□□□□ -0.99
CLN6-217ENST00000636964 IGHV3OR16-13A0A075B7E8 117 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 IGHV3-74A0A0B4J1X5 117 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 H3BRM9 83 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 SYT8Q8NBV8 401 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 CHCHD1Q96BP2 118 aaKnown RBP8.87□□□□□ -0.99
CLN6-217ENST00000636964 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 C1orf43Q9BWL3 253 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 TMEM126AQ9H061 195 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 SORL1Q92673 2214 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 MXRA5Q9NR99 2828 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 TRAV8-1A0A0A6YYK1 113 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 IGHV3-66A0A0C4DH42 116 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 LOXL1Q08397 574 aaPredicted RBP8.87□□□□□ -0.99
CLN6-217ENST00000636964 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
CLN6-217ENST00000636964 ZNF469Q96JG9 3925 aaPredicted RBP8.87□□□□□ -0.99
CLN6-217ENST00000636964 TRGV3P03979 118 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 SEC11AP67812 179 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 Q6ZUT4 128 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 BEX4Q9NWD9 120 aaPredicted RBP8.87□□□□□ -0.99
CLN6-217ENST00000636964 TMEM14CQ9P0S9 112 aa8.87□□□□□ -0.99
CLN6-217ENST00000636964 IGHV3-49A0A0A0MS15 119 aa8.86□□□□□ -0.99
CLN6-217ENST00000636964 J3QKU1 62 aa8.86□□□□□ -0.99
CLN6-217ENST00000636964 SH2D6Q7Z4S9 175 aa8.86□□□□□ -0.99
CLN6-217ENST00000636964 C3orf56Q8N813 242 aa8.86□□□□□ -0.99
CLN6-217ENST00000636964 TRBV19A0A075B6N1 114 aa8.86□□□□□ -0.99
CLN6-217ENST00000636964 ZNF414Q96IQ9 312 aa8.86□□□□□ -0.99
CLN6-217ENST00000636964 PRSS29PA6NIE9 313 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 TCRAP04437 139 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 HBBP68871 147 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 FAM106AQ4KMX7 169 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 EEF1AKMT3Q96AZ1 226 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 KLK15Q9H2R5 256 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 M0R3E3 92 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 IGHV3-11P01762 117 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
CLN6-217ENST00000636964 IGFL4Q6B9Z1 124 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms