RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 MGPP08493 103 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 EDN2P20800 178 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 S100A4P26447 101 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 Q6ZS46 218 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 EEF1AKMT3Q96AZ1 226 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 EBI3Q14213 229 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 MEGF9Q9H1U4 602 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 NHP2Q9NX24 153 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 IGKCP01834 107 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 LMO4P61968 165 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 SEC11AP67812 179 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 RPL39LQ96EH5 51 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 PTPN13Q12923 2485 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 EMP1P54849 157 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 LINC01559Q495D7 138 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 SMIM15Q7Z3B0 74 aa10.72□□□□□ -0.69
CACNA1A-228ENST00000636610 RNASE4P34096 147 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 CDKN1BP46527 198 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 HSD52Q0P140 79 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 MAPKAPK5-AS1Q8N8E1 139 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 SONP18583 2426 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 GNRH2O43555 120 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 ARL3P36405 182 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 SPCS1Q9Y6A9 102 aa10.71□□□□□ -0.69
CACNA1A-228ENST00000636610 PIEZO1Q92508 2521 aa10.71□□□□□ -0.7
CACNA1A-228ENST00000636610 TRAV41A0A0B4J266 112 aa10.71□□□□□ -0.7
CACNA1A-228ENST00000636610 IGKV3-20P01619 116 aa10.71□□□□□ -0.7
CACNA1A-228ENST00000636610 BLCAPP62952 87 aa10.71□□□□□ -0.7
CACNA1A-228ENST00000636610 SFTA2Q6UW10 78 aa10.71□□□□□ -0.7
CACNA1A-228ENST00000636610 NXT2Q9NPJ8 142 aaKnown RBP10.71□□□□□ -0.7
CACNA1A-228ENST00000636610 PF4V1P10720 104 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 C5orf56Q8N8D9 126 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 OR1N2Q8NGR9 330 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 CHAC1Q9BUX1 264 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 TRBV25-1A0A075B6N4 114 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 C1orf122Q6ZSJ8 110 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 SLC50A1Q9BRV3 221 aa10.7□□□□□ -0.7
CACNA1A-228ENST00000636610 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
CACNA1A-228ENST00000636610 PPBPP02775 128 aa10.69□□□□□ -0.7
CACNA1A-228ENST00000636610 IGHV4-38-2P0DP08 117 aa10.69□□□□□ -0.7
CACNA1A-228ENST00000636610 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-228ENST00000636610 TMEM95Q3KNT9 176 aa10.69□□□□□ -0.7
CACNA1A-228ENST00000636610 OOSP1A8MZH6 123 aa10.69□□□□□ -0.7
CACNA1A-228ENST00000636610 H3BRM9 83 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 DPM2O94777 84 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 LAGE3Q14657 143 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 NRACQ8N912 160 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 OR9G4Q8NGQ1 327 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 JPT2Q9H910 190 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 WNK1Q9H4A3 2382 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 GTF2H5Q6ZYL4 71 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 COX8CQ7Z4L0 72 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 Q8N8P6 123 aa10.68□□□□□ -0.7
CACNA1A-228ENST00000636610 ANXA2RQ3ZCQ2 193 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 SAMD5Q5TGI4 173 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 PHLDA3Q9Y5J5 127 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 IGHV4-39P01824 125 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 SMIM13P0DJ93 91 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 GNLYP22749 145 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 OR4X2Q8NGF9 303 aa10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 COL25A1Q9BXS0 654 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-228ENST00000636610 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 IGHV4-61A0A0C4DH41 118 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 H3BUX3 64 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 DPF1Q92782 380 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 A0A1W2PPM0 123 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 COTL1Q14019 142 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 NRGNQ92686 78 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 TRBV7-1A0A0A6YYK4 115 aa10.66□□□□□ -0.7
CACNA1A-228ENST00000636610 K7EP34 96 aa10.65□□□□□ -0.7
CACNA1A-228ENST00000636610 K7ERU9 68 aa10.65□□□□□ -0.7
CACNA1A-228ENST00000636610 FABP2P12104 132 aa10.65□□□□□ -0.7
CACNA1A-228ENST00000636610 GPHB5Q86YW7 130 aa10.65□□□□□ -0.7
CACNA1A-228ENST00000636610 SCGB3A1Q96QR1 104 aa10.65□□□□□ -0.7
CACNA1A-228ENST00000636610 NACAE9PAV3 2078 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 A0A087WWL8 130 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 RAB9AP51151 201 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 OR10J6PQ8NGY7 276 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 PIFOQ8TCI5 191 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 HIST1H4GQ99525 98 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 CCDC168Q8NDH2 2452 aa10.65□□□□□ -0.71
CACNA1A-228ENST00000636610 UFSP1Q6NVU6 142 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 C10orf99Q6UWK7 81 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 MUC4Q99102 2169 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 SRSF1Q07955 248 aaKnown RBP eCLIP10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 FAM74A4Q5TZK3 123 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 CYSLTR1Q9Y271 337 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
CACNA1A-228ENST00000636610 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms