RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 SHROOM2Q13796 1616 aa-2.02□□□□□ -2.73
CDKL5-210ENST00000636046 ZNF831Q5JPB2 1677 aa-2.02□□□□□ -2.73
CDKL5-210ENST00000636046 PRDM2Q13029 1718 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TRBV7-3A0A075B6L6 115 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 CXorf51AA0A1B0GTR3 108 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 A0A1W2PRV1 198 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 H7C2Y5 167 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 ZNF701M0R085 212 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 ZNF593O00488 134 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 MPHOSPH10O00566 681 aaKnown RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 LIN7AO14910 233 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 ARPC3O15145 178 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TIMM8AO60220 97 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 ARL6IP5O75915 188 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 SIX6O95475 246 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 PPP1R17O96001 155 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 IFNA10P01566 189 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 PIRTP0C851 137 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 DEFB130BP0DP73 79 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 DEFB130AP0DP74 79 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 IL10P22301 178 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 CRYBB2P43320 205 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TNNT2P45379 298 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 BEX3Q00994 111 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 FABP5Q01469 135 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 RAD51Q06609 339 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 NMSQ5H8A3 153 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 COQ5Q5HYK3 327 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 PIP5KL1Q5T9C9 394 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TTC23Q5W5X9 447 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TTC33Q6PID6 262 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 SYS1Q8N2H4 156 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 SPICQ8N5J4 248 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 FAM216BQ8N7L0 139 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 FDCSPQ8NFU4 85 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 OR5AK3PQ8NH89 298 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 RNASEH2CQ8TDP1 164 aaKnown RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 DIRC1Q969H9 104 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 IFI27L1Q96BM0 104 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 C8orf76Q96K31 380 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 CCDC43Q96MW1 224 aaKnown RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TMEM126AQ9H061 195 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 TMEM133Q9H2Q1 129 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 RGCCQ9H4X1 137 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 MYH16Q9H6N6 1097 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 BLOC1S6Q9UL45 172 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 HDGFL3Q9Y3E1 203 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 DHX29Q7Z478 1369 aaKnown RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 PRG4Q92954 1404 aaPredicted RBP-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 SHANK2Q9UPX8 1470 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 DNMBPQ6XZF7 1577 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 PIK3C2BO00750 1634 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 LRP5O75197 1615 aa-2.03□□□□□ -2.73
CDKL5-210ENST00000636046 FAM236DA0A1B0GTK5 79 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 FAM240BA0A1B0GVZ2 78 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 C20orf202A1L168 122 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 DISP2A7MBM2 1401 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 C1orf196B1AJZ1 125 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 GGCTO75223 188 aaKnown RBP-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 TSPAN12O95859 305 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 OTCP00480 354 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 FAM236CP0DP71 79 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 RRM2P31350 389 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 UBE2D1P51668 147 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 GTF2A1P52655 376 aaPredicted RBP-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 CCL18P55774 89 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 CXCR4P61073 352 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 B2MP61769 119 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 CAV1Q03135 178 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 COTL1Q14019 142 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 C10orf113Q5VZT2 155 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 SFXN4Q6P4A7 337 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 C5orf46Q6UWT4 87 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 NUP35Q8NFH5 326 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 STAG3L4Q8TBR4 150 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 HAVCR2Q8TDQ0 301 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 ANKRD36BP1Q96IX9 119 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 POLE3Q9NRF9 147 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 COMMD8Q9NX08 183 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 PSMC3IPQ9P2W1 217 aaPredicted RBP-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 MED23Q9ULK4 1368 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 NOP58Q9Y2X3 529 aaKnown RBP-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 SAR1BQ9Y6B6 198 aa-2.04□□□□□ -2.74
CDKL5-210ENST00000636046 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 RNF13O43567 381 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 CST4P01036 141 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 ORM1P02763 201 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 IFNW1P05000 195 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 MYL2P10916 166 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 RAB10P61026 200 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 YWHAEP62258 255 aaKnown RBP-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 RPL31P62899 125 aaKnown RBP-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 FABP9Q0Z7S8 132 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 JOSD1Q15040 202 aaPredicted RBP-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 STK38Q15208 465 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 GUK1Q16774 197 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 TMEM78Q5T7P6 136 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 Q6AWC8 147 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 PET117Q6UWS5 81 aa-2.05□□□□□ -2.74
CDKL5-210ENST00000636046 TRAM1L1Q8N609 369 aa-2.05□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms