RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MGST1P10620 155 aaKnown RBP10.75□□□□□ -0.69
LINC00339-208ENST00000634934 DEFB131AP59861 70 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 UBE2G1P62253 170 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 PMCHL1Q16048 86 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 PSG3Q16557 428 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 LYPD1Q8N2G4 141 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 ZNF738Q8NE65 137 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 C18orf32Q8TCD1 76 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 OTORQ9NRC9 128 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 PGPA6NDG6 321 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 EREGO14944 169 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 SRIP30626 198 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 FOXA3P55318 350 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-208ENST00000634934 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-208ENST00000634934 ODF3L2Q3SX64 289 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 GATD1Q8NB37 220 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 M0R3E3 92 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 FRMD6-AS1P0C7T7 363 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 AMTP48728 403 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 GAGE1Q13065 139 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 NIT1Q86X76 327 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 APRG1Q8IVJ8 170 aa10.74□□□□□ -0.69
LINC00339-208ENST00000634934 RPP21Q9H633 154 aaKnown RBP10.74□□□□□ -0.69
LINC00339-208ENST00000634934 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
LINC00339-208ENST00000634934 TCRAP04437 139 aa10.73□□□□□ -0.69
LINC00339-208ENST00000634934 DEFB1P60022 68 aa10.73□□□□□ -0.69
LINC00339-208ENST00000634934 ZNF124Q15973 351 aa10.73□□□□□ -0.69
LINC00339-208ENST00000634934 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-208ENST00000634934 WFDC10AQ9H1F0 79 aa10.73□□□□□ -0.69
LINC00339-208ENST00000634934 RPH3ALQ9UNE2 315 aa10.73□□□□□ -0.69
LINC00339-208ENST00000634934 A0A1B0GW15 77 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 F2Z2F3 143 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 TCAPO15273 167 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 SLC25A5P05141 298 aaKnown RBP10.72□□□□□ -0.69
LINC00339-208ENST00000634934 PMCHP20382 165 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 CSN1S1P47710 185 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 HBBP68871 147 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 SLAQ13239 276 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-208ENST00000634934 MRPL54Q6P161 138 aaKnown RBP10.72□□□□□ -0.69
LINC00339-208ENST00000634934 CHCHD1Q96BP2 118 aaKnown RBP10.72□□□□□ -0.69
LINC00339-208ENST00000634934 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
LINC00339-208ENST00000634934 KNCNA6PVL3 124 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 F6UB75 175 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 CRXO43186 299 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-208ENST00000634934 DEFB125Q8N687 156 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.69
LINC00339-208ENST00000634934 RCHY1Q96PM5 261 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
LINC00339-208ENST00000634934 PRKDCP78527 4128 aaKnown RBP10.7□□□□□ -0.7
LINC00339-208ENST00000634934 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 FBLL1A6NHQ2 334 aaKnown RBP10.7□□□□□ -0.7
LINC00339-208ENST00000634934 HIGD1CA8MV81 97 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 TCL1AP56279 114 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 GNG5P63218 68 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 Q8N1Y9 231 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 BORCS7Q96B45 105 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 NDFIP1Q9BT67 221 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
LINC00339-208ENST00000634934 OR5AL1P0C617 328 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 GDF5OSQ5U4N7 250 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 Q6AWC8 147 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 FOXI2Q6ZQN5 318 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 COX8CQ7Z4L0 72 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
LINC00339-208ENST00000634934 IGKV2-40A0A087WW87 121 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-208ENST00000634934 IGKV2D-40P01614 121 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-208ENST00000634934 P01737 135 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-208ENST00000634934 Q86TA4 180 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 OR8A1Q8NGG7 326 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 MRPS16Q9Y3D3 137 aaKnown RBP10.68□□□□□ -0.7
LINC00339-208ENST00000634934 A0A0J9YX75 114 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 IGLC3P0DOY3 106 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 KRTDAPP60985 99 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 GOLT1AQ6ZVE7 132 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 STHQ8IWL8 128 aa10.68□□□□□ -0.7
LINC00339-208ENST00000634934 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 HSBP1O75506 76 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 CA1P00915 261 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-208ENST00000634934 IGLV2-11P01706 119 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 HLA-DRB4P13762 266 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 ERCC8Q13216 396 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 KIAA1644Q3SXP7 199 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 TDRG1Q3Y452 100 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 ZNF705AQ6ZN79 300 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-208ENST00000634934 PAM16Q9Y3D7 125 aa10.67□□□□□ -0.7
LINC00339-208ENST00000634934 HLA-DRB4X5D2U9 266 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms