RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	VPREB1	P12018	145 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	SRI	P30626	198 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZNF138	P52744	262 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	HIST1H1A	Q02539	215 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ERCC8	Q13216	396 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	SLA	Q13239	276 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	KIAA1644	Q3SXP7	199 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	SAMD13	Q5VXD3	122 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403		Q75L30	129 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	BAGE3	Q86Y29	109 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	RNF182	Q8N6D2	247 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	LINC00477	Q96M19	166 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ASCL2	Q99929	193 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	FOXC2	Q99958	501 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	AGPAT4-IT1	Q9H0P7	198 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	DAZ1	Q9NQZ3	744 aa	Known RBP	4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	UFC1	Q9Y3C8	167 aa		4.07	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ABCA1	O95477	2261 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	CFAP46	Q8IYW2	2715 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IGKV2D-30	A0A075B6S6	120 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IGHV4OR15-8	A0A075B7B6	117 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	TRBV7-9	A0A0J9YWB2	115 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	LGALS9	O00182	355 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	LGALS1	P09382	135 aa	Known RBP	4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IGLC6	P0CF74	106 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZNF80	P51504	273 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	TMEM78	Q5T7P6	136 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	C10orf99	Q6UWK7	81 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZNF493	Q6ZR52	646 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IL17REL	Q6ZVW7	336 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	SIGLECL1	Q8N7X8	197 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	WFDC11	Q8NEX6	87 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403		Q8TAT8	98 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	C18orf32	Q8TCD1	76 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	BORCS7	Q96B45	105 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	UBE2E2	Q96LR5	201 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	RHPN1-AS1	Q9BWJ2	59 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	NRN1	Q9NPD7	142 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	GSN-AS1	Q9NRJ2	163 aa		4.06	□□□□□ -1.76
SMARCA2-222	ENST00000634403	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	PCP4L1	A6NKN8	68 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403		F2Z2F3	143 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	CD5L	O43866	347 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	GPX1	P07203	203 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ARMS2	P0C7Q2	107 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	PRB4	P10163	310 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	CTRL	P40313	264 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	KRTAP1-1	Q07627	177 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	LYZL1	Q6UWQ5	148 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZNF738	Q8NE65	137 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	KCNS1	Q96KK3	526 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	FAM19A4	Q96LR4	140 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	C1QTNF4	Q9BXJ3	329 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	CNFN	Q9BYD5	112 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	UBR5	O95071	2799 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	AKAP6	Q13023	2319 aa		4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	USP9X	Q93008	2570 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-222	ENST00000634403	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.04	□□□□□ -1.76	4e-6	■■■■■ 28
SMARCA2-222	ENST00000634403	TMEM213	A2RRL7	107 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZNF324	O75467	553 aa	Predicted RBP	4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ORM1	P02763	201 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ID1	P41134	155 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	GAGE2B	Q13066	116 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IQCJ	Q1A5X6	159 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	GAGE2E	Q4V326	116 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	FAM104B	Q5XKR9	115 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	GAGE2A	Q6NT46	116 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	NIT1	Q86X76	327 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	APRG1	Q8IVJ8	170 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	FER1L6-AS1	Q8NA97	138 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	OR10J6P	Q8NGY7	276 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	DCANP1	Q8TF63	244 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	CHCHD1	Q96BP2	118 aa	Known RBP	4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	RCHY1	Q96PM5	261 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	SAMD10	Q9BYL1	202 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	GAGE2D	Q9UEU5	116 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403		U3KQK5	164 aa		4.04	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IGHV4-4	A0A075B6R2	117 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403		A0A087WW49	117 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	TMSB15B	A0A087X1C1	80 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	IGKV3D-20	A0A0C4DH25	116 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	PMCH	P20382	165 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	KRTAP10-11	P60412	298 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	PKIA	P61925	76 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZFAND2A	Q8N6M9	145 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	KLHDC1	Q8N7A1	406 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	OR8A1	Q8NGG7	326 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	C4orf3	Q8WVX3	66 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	DUX5	Q96PT3	197 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ODF3	Q96PU9	254 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	TMEM191A	Q9H0A3	160 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	NAGK	Q9UJ70	344 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	ZNF462	Q96JM2	2506 aa		4.03	□□□□□ -1.76
SMARCA2-222	ENST00000634403	TRAV2	A0A0B4J234	112 aa		4.02	□□□□□ -1.77
SMARCA2-222	ENST00000634403	TRAV21	A0A0B4J279	112 aa		4.02	□□□□□ -1.77
SMARCA2-222	ENST00000634403	C2orf70	A6NJV1	201 aa		4.02	□□□□□ -1.77
SMARCA2-222	ENST00000634403	LINC01619	G3V211	115 aa		4.02	□□□□□ -1.77
SMARCA2-222	ENST00000634403		K7EQG2	157 aa		4.02	□□□□□ -1.77
SMARCA2-222	ENST00000634403	SNAI2	O43623	268 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms