RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 P01737 135 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 MALP21145 153 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 LAIR2Q6ISS4 152 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 PHF5AQ7RTV0 110 aaKnown RBP3.32□□□□□ -1.88
LINC00649-220ENST00000628906 S100A7AQ86SG5 101 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 KRTAP11-1Q8IUC1 163 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 NANOGP1Q8N7R0 232 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 LINC00304Q8N9R0 145 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 CCDC197Q8NCU1 140 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 ANP32BQ92688 251 aaKnown RBP3.32□□□□□ -1.88
LINC00649-220ENST00000628906 TP53RKQ96S44 253 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 ORC6Q9Y5N6 252 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 A0A087WZ39 114 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 H3BQ15 152 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 M0R3E3 92 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 RGS10O43665 173 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 IGLC2P0DOY2 106 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 UCP3P55916 312 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 ZNF266Q14584 549 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 SURF2Q15527 256 aaPredicted RBP3.31□□□□□ -1.88
LINC00649-220ENST00000628906 Q6AWC8 147 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 CFAP161Q6P656 301 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 PATE2Q6UY27 113 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 ZFP2Q6ZN57 461 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 BPIFA4PQ86YQ2 179 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 OR13C8Q8NGS7 320 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 CACFD1Q9UGQ2 172 aa3.31□□□□□ -1.88
LINC00649-220ENST00000628906 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 TRBV6-8A0A0A6YYG3 113 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 LOC100130705A0A1B0GUX0 176 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 GAGE12HA6NDE8 117 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 OR5G3P0C626 314 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 RND3P61587 244 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 PKIAP61925 76 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 C9orf116Q5BN46 136 aaPredicted RBP3.3□□□□□ -1.88
LINC00649-220ENST00000628906 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 PRSS48Q7RTY5 328 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 OR2T35Q8NGX2 323 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 OR2G3Q8NGZ4 309 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 PTH2Q96A98 100 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 KIR2DL4Q99706 377 aa3.3□□□□□ -1.88
LINC00649-220ENST00000628906 MYL12BO14950 172 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 PMP2P02689 132 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 IL5P05113 134 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 RAB2AP61019 212 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 REG3AQ06141 175 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 ZNF674Q2M3X9 581 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 KRTAP13-2Q52LG2 175 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 TMEM78Q5T7P6 136 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 C14orf178Q8N769 122 aaPredicted RBP3.29□□□□□ -1.88
LINC00649-220ENST00000628906 KCNS1Q96KK3 526 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 ARV1Q9H2C2 271 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 POMPQ9Y244 141 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 AP4S1Q9Y587 144 aa3.29□□□□□ -1.88
LINC00649-220ENST00000628906 TRAV18A0A075B6X5 111 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
LINC00649-220ENST00000628906 C3orf85A0A1B0GTC6 90 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 PGPEP1LA6NFU8 196 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 PRSS46E5RG02 174 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 CDS2O95674 445 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 LINC00869P0C866 280 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 FCGR1AP12314 374 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 RBX1P62877 108 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 FOXI1Q12951 378 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 UFSP1Q6NVU6 142 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 CYP2G1PQ6ZSU1 146 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 RNASE11Q8TAA1 199 aaKnown RBP3.28□□□□□ -1.88
LINC00649-220ENST00000628906 DTD1Q8TEA8 209 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 ATP5SQ99766 215 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 ANAPC10Q9UM13 185 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 PRELID1Q9Y255 219 aa3.28□□□□□ -1.88
LINC00649-220ENST00000628906 TRAV1-2A0A0B4J238 106 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 F5H697 171 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 PDCD5O14737 125 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 ZNF861PO60384 105 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 SCGB1D2O95969 90 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 TYMSP04818 313 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 HIST1H1EP10412 219 aaKnown RBP3.27□□□□□ -1.89
LINC00649-220ENST00000628906 RAB5CP51148 216 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 UBE2D3P61077 147 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 SELENOTP62341 195 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 UBE2D2P62837 147 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 TRAM1Q15629 374 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 SP6Q3SY56 376 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 LINC00305Q7Z4B0 112 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 CYGBQ8WWM9 190 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 ZNF486Q96H40 463 aaPredicted RBP3.27□□□□□ -1.89
LINC00649-220ENST00000628906 ARL6Q9H0F7 186 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 PARLQ9H300 379 aa3.27□□□□□ -1.89
LINC00649-220ENST00000628906 IGKV2-40A0A087WW87 121 aaPredicted RBP3.26□□□□□ -1.89
LINC00649-220ENST00000628906 GYG2O15488 501 aa3.26□□□□□ -1.89
LINC00649-220ENST00000628906 NDUFB4O95168 129 aa3.26□□□□□ -1.89
LINC00649-220ENST00000628906 IGKV2D-40P01614 121 aaPredicted RBP3.26□□□□□ -1.89
LINC00649-220ENST00000628906 MT2AP02795 61 aa3.26□□□□□ -1.89
LINC00649-220ENST00000628906 PIGPP57054 158 aa3.26□□□□□ -1.89
LINC00649-220ENST00000628906 TAS2R46P59540 309 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms