RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PDE6DO43924 150 aa14.4□□□□□ -0.1
PTCD3-220ENST00000627371 TMEM183AQ8IXX5 376 aa14.4□□□□□ -0.1
PTCD3-220ENST00000627371 ZC2HC1AQ96GY0 325 aa14.4□□□□□ -0.1
PTCD3-220ENST00000627371 KCNS1Q96KK3 526 aa14.4□□□□□ -0.1
PTCD3-220ENST00000627371 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
PTCD3-220ENST00000627371 C11orf21Q9P2W6 132 aa14.39□□□□□ -0.11
PTCD3-220ENST00000627371 TYMSP04818 313 aa14.38□□□□□ -0.11
PTCD3-220ENST00000627371 RPL35P42766 123 aaKnown RBP14.38□□□□□ -0.11
PTCD3-220ENST00000627371 MDFICQ9P1T7 246 aa14.38□□□□□ -0.11
PTCD3-220ENST00000627371 FABP5P3A8MUU1 101 aa14.37□□□□□ -0.11
PTCD3-220ENST00000627371 SPINK4O60575 86 aa14.37□□□□□ -0.11
PTCD3-220ENST00000627371 Q6ZTI0 123 aa14.37□□□□□ -0.11
PTCD3-220ENST00000627371 DERL1Q9BUN8 251 aa14.37□□□□□ -0.11
PTCD3-220ENST00000627371 TRGV1A0A0A0MS02 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 IGHV3-16A0A0C4DH30 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 GAGE12BA1L429 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 GNRH2O43555 120 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 GAGE7O76087 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 GAGE12FP0CL80 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 GAGE12GP0CL81 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 GAGE12IP0CL82 117 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 CRIP1P50238 77 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 FAM162BQ5T6X4 162 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 BAGE2Q86Y30 109 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 NHLRC2Q8NBF2 726 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 MLST8Q9BVC4 326 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 SACSQ9NZJ4 4579 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 ALMS1Q8TCU4 4167 aa14.36□□□□□ -0.11
PTCD3-220ENST00000627371 RBFOX3A6NFN3 312 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 IGLL5B9A064 214 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 ATP5G1P05496 136 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 HTN3P15516 51 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 TCTAP57738 103 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 ZNF674Q2M3X9 581 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 LGALS9BQ3B8N2 356 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 SPXQ9BT56 116 aa14.35□□□□□ -0.11
PTCD3-220ENST00000627371 MUC4Q99102 2169 aa14.34□□□□□ -0.11
PTCD3-220ENST00000627371 IGHV4-4A0A075B6R2 117 aa14.34□□□□□ -0.11
PTCD3-220ENST00000627371 SH2D1AO60880 128 aa14.34□□□□□ -0.11
PTCD3-220ENST00000627371 ZNF506Q5JVG8 444 aa14.34□□□□□ -0.11
PTCD3-220ENST00000627371 C18orf15Q96N68 181 aa14.34□□□□□ -0.11
PTCD3-220ENST00000627371 MED9Q9NWA0 146 aa14.34□□□□□ -0.11
PTCD3-220ENST00000627371 DNAH1Q9P2D7 4330 aa14.33□□□□□ -0.11
PTCD3-220ENST00000627371 IGKV3D-20A0A0C4DH25 116 aa14.33□□□□□ -0.12
PTCD3-220ENST00000627371 CENPWQ5EE01 88 aa14.33□□□□□ -0.12
PTCD3-220ENST00000627371 FAM210BQ96KR6 192 aa14.33□□□□□ -0.12
PTCD3-220ENST00000627371 MRPL16Q9NX20 251 aaKnown RBP14.33□□□□□ -0.12
PTCD3-220ENST00000627371 APLNQ9ULZ1 77 aa14.32□□□□□ -0.12
PTCD3-220ENST00000627371 TRGV2A0A075B6R0 118 aa14.31□□□□□ -0.12
PTCD3-220ENST00000627371 ORM1P02763 201 aa14.31□□□□□ -0.12
PTCD3-220ENST00000627371 TOR2AQ5JU69 321 aa14.31□□□□□ -0.12
PTCD3-220ENST00000627371 PCNPQ8WW12 178 aaKnown RBP14.31□□□□□ -0.12
PTCD3-220ENST00000627371 SMIM12Q96EX1 92 aa14.31□□□□□ -0.12
PTCD3-220ENST00000627371 FAM210AQ96ND0 272 aa14.31□□□□□ -0.12
PTCD3-220ENST00000627371 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 B4DEV8 164 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 F5H768 121 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 TMEM250H0YL14 139 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 M0R2P5 195 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 GNG4P50150 75 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 LINC01559Q495D7 138 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 RASL10AQ92737 203 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 NDUFAF3Q9BU61 184 aa14.3□□□□□ -0.12
PTCD3-220ENST00000627371 LCE6AA0A183 80 aa14.29□□□□□ -0.12
PTCD3-220ENST00000627371 KRBOX1C9JBD0 128 aa14.29□□□□□ -0.12
PTCD3-220ENST00000627371 M0R036 132 aa14.29□□□□□ -0.12
PTCD3-220ENST00000627371 NDUFS6O75380 124 aaKnown RBP14.29□□□□□ -0.12
PTCD3-220ENST00000627371 RNASE3P12724 160 aaKnown RBP14.29□□□□□ -0.12
PTCD3-220ENST00000627371 TMEM88Q6PEY1 159 aa14.29□□□□□ -0.12
PTCD3-220ENST00000627371 EIF5A2Q9GZV4 153 aaKnown RBP14.29□□□□□ -0.12
PTCD3-220ENST00000627371 TRBV20OR9-2A0A075B6H5 130 aa14.28□□□□□ -0.12
PTCD3-220ENST00000627371 NACAE9PAV3 2078 aa14.28□□□□□ -0.12
PTCD3-220ENST00000627371 IGLV2-8P01709 118 aa14.28□□□□□ -0.12
PTCD3-220ENST00000627371 ASIPP42127 132 aa14.28□□□□□ -0.12
PTCD3-220ENST00000627371 HOXA5P20719 270 aa14.27□□□□□ -0.13
PTCD3-220ENST00000627371 S100A4P26447 101 aaKnown RBP14.27□□□□□ -0.13
PTCD3-220ENST00000627371 DNLZQ5SXM8 178 aa14.27□□□□□ -0.13
PTCD3-220ENST00000627371 PRR27Q6MZM9 219 aa14.27□□□□□ -0.13
PTCD3-220ENST00000627371 LINC00476Q8WZB0 136 aa14.27□□□□□ -0.13
PTCD3-220ENST00000627371 PARLQ9H300 379 aa14.27□□□□□ -0.13
PTCD3-220ENST00000627371 C9JCJ5 164 aa14.26□□□□□ -0.13
PTCD3-220ENST00000627371 PGPEP1LA6NFU8 196 aa14.25□□□□□ -0.13
PTCD3-220ENST00000627371 MGST1P10620 155 aaKnown RBP14.25□□□□□ -0.13
PTCD3-220ENST00000627371 OR5I1Q13606 314 aa14.25□□□□□ -0.13
PTCD3-220ENST00000627371 ZNF575Q86XF7 245 aa14.25□□□□□ -0.13
PTCD3-220ENST00000627371 PTH2Q96A98 100 aa14.25□□□□□ -0.13
PTCD3-220ENST00000627371 IL36BQ9NZH7 164 aa14.25□□□□□ -0.13
PTCD3-220ENST00000627371 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
PTCD3-220ENST00000627371 C15orf53Q8NAA6 179 aa14.24□□□□□ -0.13
PTCD3-220ENST00000627371 VPS13DQ5THJ4 4388 aa14.24□□□□□ -0.13
PTCD3-220ENST00000627371 TRAV4A0A0B4J268 109 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 GRIFINA4D1Z8 144 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 H3BVH4 76 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 IGHV3-53P01767 116 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 CXCL1P09341 107 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 RPL19P84098 196 aaKnown RBP14.23□□□□□ -0.13
PTCD3-220ENST00000627371 ZNF876PQ49A33 203 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 LGALS9CQ6DKI2 356 aa14.23□□□□□ -0.13
PTCD3-220ENST00000627371 BIN3Q9NQY0 253 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms