RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IGKCP01834 107 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 BRD3OSQ6XYD6 125 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 NRACQ8N912 160 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 JMJD8Q96S16 334 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 MOB4Q9Y3A3 225 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 ITPR1Q14643 2758 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 GLMPQ8WWB7 406 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 C19orf84I3L1E1 186 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 TRBV12-3P01733 135 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 ARL3P36405 182 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 OCIAD2Q56VL3 154 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 UNQ9165/PRO28630Q6UXU0 137 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 GTSCR1Q86UQ5 136 aa8.59□□□□□ -1.03
VARS2-213ENST00000625423 VPS13CQ709C8 3753 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 SPRY2O43597 315 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 PIFOQ8TCI5 191 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 VPS25Q9BRG1 176 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 CELSR1Q9NYQ6 3014 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 TMEM8BA6NDV4 472 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 DEFB1P60022 68 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 LAGE3Q14657 143 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 C19orf54Q5BKX5 351 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 PRORYQ9H606 182 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 A0A0G2JLM5 398 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 FAM223BA6NKX1 122 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 ATP5LO75964 103 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 DPM2O94777 84 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 ZC2HC1BQ5TFG8 222 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 FAM223AQ8IWN6 122 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 ITLN2Q8WWU7 325 aaPredicted RBP8.58□□□□□ -1.04
VARS2-213ENST00000625423 TMEM160Q9NX00 188 aa8.58□□□□□ -1.04
VARS2-213ENST00000625423 USP24Q9UPU5 2620 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 TRAV40A0A0B4J280 105 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 C9orf139Q6ZV77 190 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 MYOZ3Q8TDC0 251 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
VARS2-213ENST00000625423 DOPEY2Q9Y3R5 2298 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 IGHV4-39P01824 125 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 GPHB5Q86YW7 130 aa8.57□□□□□ -1.04
VARS2-213ENST00000625423 MRPL35Q9NZE8 188 aaKnown RBP8.57□□□□□ -1.04
VARS2-213ENST00000625423 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 IGHV1-69DA0A0B4J2H0 117 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 IGHV1-69P01742 117 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 GCSHP23434 173 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 LY6EQ16553 131 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 GTF2H5Q6ZYL4 71 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 SMPXQ9UHP9 88 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 M0R381 172 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 IGHV3-11P01762 117 aa8.56□□□□□ -1.04
VARS2-213ENST00000625423 SRSF1Q07955 248 aaKnown RBP eCLIP8.55□□□□□ -1.042e-10■□□□□ 10.3
VARS2-213ENST00000625423 PSMG4Q5JS54 123 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 ZFAND2AQ8N6M9 145 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 CHAC1Q9BUX1 264 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 CRIP2P52943 208 aaPredicted RBP8.55□□□□□ -1.04
VARS2-213ENST00000625423 FXYD2P54710 66 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 RPL11P62913 178 aaKnown RBP8.55□□□□□ -1.04
VARS2-213ENST00000625423 OR10J6PQ8NGY7 276 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 ATP6V0BQ99437 205 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 IGKV3-7A0A075B6H7 116 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 TRBV25-1A0A075B6N4 114 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 K7EP34 96 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
VARS2-213ENST00000625423 NDUFA4O00483 81 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 S100A4P26447 101 aaKnown RBP8.54□□□□□ -1.04
VARS2-213ENST00000625423 IGHV4-61A0A0C4DH41 118 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 F6UB75 175 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 SOCS3O14543 225 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 IGHV4-38-2P0DP08 117 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 KLK15Q9H2R5 256 aa8.54□□□□□ -1.04
VARS2-213ENST00000625423 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 A0A087WX48 190 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 A0A1W2PPM0 123 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 SMIM13P0DJ93 91 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 ANXA2RQ3ZCQ2 193 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 C14orf178Q8N769 122 aaPredicted RBP8.53□□□□□ -1.04
VARS2-213ENST00000625423 OVOL1O14753 267 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 SAP30O75446 220 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
VARS2-213ENST00000625423 MAPKAPK5-AS1Q8N8E1 139 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 MEGF9Q9H1U4 602 aa8.53□□□□□ -1.04
VARS2-213ENST00000625423 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
VARS2-213ENST00000625423 RASL10AQ92737 203 aa8.52□□□□□ -1.05
VARS2-213ENST00000625423 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
VARS2-213ENST00000625423 PHLDA3Q9Y5J5 127 aa8.52□□□□□ -1.05
VARS2-213ENST00000625423 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.05
VARS2-213ENST00000625423 SONP18583 2426 aaKnown RBP8.52□□□□□ -1.05
VARS2-213ENST00000625423 K7EMI3 77 aa8.52□□□□□ -1.05
VARS2-213ENST00000625423 K7ERJ3 54 aa8.52□□□□□ -1.05
VARS2-213ENST00000625423 K7ERU9 68 aa8.52□□□□□ -1.05
VARS2-213ENST00000625423 PF4V1P10720 104 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms